LENGTH	1238
LCA	Viruses
NBSEQ	109
KEYWORDS:
rna	630
polymerase	630
domain	534
rpb2	523
subunit	107
beta	107
splicing	6
intein	6
hint	5
like	4
laglidadg	4
associated	2
hom_end	2
module	2
endonuclease	1
homing	1
pretoxin	1
KEYWORDS FROM SEQUENCES:
rna	99
polymerase	99
dna	87
directed	59
subunit	57
virus	46
dependent	28
beta	20
rpb2	17
second	17
largest	17
putative	14
iridovirus	13
containing	10
intein	10
lake	7
frog	7
domain	6
mimivirus	6
disease	6
ranavirus	6
iridescent	6
protein	5
acanthamoeba	5
lymphocystis	5
hypothetical	4
moumouvirus	4
polyphaga	4
megavirus	4
emiliania	4
huxleyi	4
ascovirus	4
phycodnavirus	4
invertebrate	4
organic	4
large	3
necrosis	3
megaviridae	3
environmental	3
sample	3
like	2
marseillevirus	2
tupanvirus	2
common	2
dishui	2
chrysochromulina	2
ericina	2
tiger	2
midwife	2
toad	2
phaeocystis	2
globosa	2
pyramimonas	2
orientalis	2
mimiviridae	2
choanov1	2
algae	2
tetraselmis	2
toursvirus	2
erythrocytic	2
goulette	1
chiliensis	1
courdo7	1
vitis	1
shrimp	1
chlorella	1
associated	1
yellow	1
kda	1
maliensis	1
fadolivirus	1
soda	1
lcmiac01	1
lcmiac02	1
indivirus	1
ilv1	1
klosneuvirus	1
knv1	1
edafosvirus	1
deep	1
ocean	1
spodoptera	1
frugiperda	1
orf3	1
monve	1
99b1	1
and	1
heliothis	1
virescens	1
trichoplusia	1
156	1
lcivac01	1
catovirus	1
ctv1	1
bodo	1
saltans	1
courdo11	1
nioz	1
reunion	1
lcmac202	1
infectious	1
spleen	1
kidney	1
croaker	1
grouper	1
scale	1
drop	1
mimi	1
isolate	1
china	1
south	1
american	1
cichlid	1
european	1
chub	1
hyperionvirus	1
cafeteria	1
roenbergensis	1
pw1	1
hokovirus	1
hkv1	1
xw01	1
castellanii	1
short	1
finned	1
eel	1
largemouth	1
bass	1
body	1
hemocyte	1
wiseana	1
carnivorous	1
sponge	1
homavirus	1
epizootic	1
haematopoietic	1
singapore	1
maximus	1
tortoise	1
cod	1
terrestrivirus	1
mamavirus	1
128	1
faunusvirus	1
aureococcus	1
anophagefferens	1
uu159	1
bohle	1
lcmac201	1
rock	1
bream	1
armadillidium	1
vulgare	1
andrias	1
davidianus	1
namao	1
cherax	1
quadricarinatus	1
liz	1
criv	1
dasineura	1
jujubifolia	1
diadromus	1
pulchellus	1
rhinella	1
marina	1
diabrotica	1
turbot	1
reddish	1
regina	1
ddrp	1
083l	1
428l	1
orf_122l	1
german	1
gecko	1
l244	1
ddrpii	1
lcdv	1
SEQUENCES:
acc|GENBANK|QDZ44437.1|GENBANK|MK959604|DNA-dependent RNA polymerase II second largest [Frog virus 3]
acc|GENBANK|QDZ44530.1|GENBANK|MK959605|DNA-dependent RNA polymerase II second largest [Frog virus 3]
acc|GENBANK|QDZ44704.1|GENBANK|MK959607|DNA-dependent RNA polymerase II second largest [Frog virus 3]
acc|GENBANK|QDZ45074.1|GENBANK|MK959611|DNA-dependent RNA polymerase II second largest [Frog virus 3]
acc|GENBANK|QGR53808.2|NEIGHBOR|MK978772|DNA-directed RNA polymerase RPB2 [Moumouvirus maliensis]
acc|GENBANK|QKF94060.1|GENBANK|MT418680|DNA-directed RNA polymerase subunit 2 [Fadolivirus 1]
acc|GENBANK|QXE50727.1|GENBANK|MW464172|DNA dependent RNA polymerase second largest [Infectious spleen and kidney necrosis virus]
acc|GENBANK|QQA04029.1|GENBANK|MW139932|DNA dependent RNA polymerase beta subunit [Large yellow croaker iridovirus]
acc|GENBANK|QIH04949.1|GENBANK|MK867691|DdRp [Dasineura jujubifolia toursvirus 2a]
acc|GENBANK|AGF85485.1|GENBANK|KC008572|DNA-directed RNA polymerase subunit 2 [Moumouvirus goulette]
acc|REFSEQ|YP_009552364.1|REFSEQ|NC_040612|083L [Cherax quadricarinatus iridovirus]
acc|REFSEQ|YP_010084821.1|REFSEQ|NC_055165|DNA-directed RNA polymerase II second largest [Shrimp hemocyte iridescent virus]
acc|REFSEQ|YP_010087885.1|REFSEQ|NC_055603|RNA polymerase beta subunit [Lymphocystis disease virus 4]
acc|REFSEQ|YP_654581.1|REFSEQ|NC_008187|hypothetical protein [Invertebrate iridescent virus 3]
acc|REFSEQ|NP_078633.1|REFSEQ|NC_001824|DNA-directed RNA polymerase subunit 2 [Lymphocystis disease virus 1]
acc|REFSEQ|YP_004732897.1|REFSEQ|NC_015780|hypothetical protein [Wiseana iridescent virus]
acc|REFSEQ|YP_009046809.1|REFSEQ|NC_024451|DNA-directed RNA polymerase II subunit RPB2 [Armadillidium vulgare iridescent virus]
acc|REFSEQ|YP_009182042.1|REFSEQ|NC_028461|DNA dependent RNA polymerase b subunit [Epizootic haematopoietic necrosis virus]
acc|REFSEQ|YP_009506723.1|REFSEQ|NC_038507|DNA-dependent RNA polymerase II second [Bohle iridovirus]
acc|REFSEQ|YP_762407.1|REFSEQ|NC_008361|128.1 kDa DNA-directed RNA polymerase II subunit [Spodoptera frugiperda ascovirus 1a]
acc|REFSEQ|YP_009640061.1|REFSEQ|NC_011335|hypothetical protein [Diadromus pulchellus ascovirus 4a]
acc|REFSEQ|NP_149891.1|REFSEQ|NC_003038|428L [Invertebrate iridescent virus 6]
acc|REFSEQ|YP_294192.1|REFSEQ|NC_007346|putative DNA-directed RNA polymerase II subunit [Emiliania huxleyi virus 86]
acc|REFSEQ|YP_003986740.1|REFSEQ|NC_014649|DNA-directed RNA polymerase subunit 2 [Acanthamoeba polyphaga mimivirus]
acc|REFSEQ|YP_008052526.1|REFSEQ|NC_021312|DNA-directed RNA polymerase II subunit RPB2 [Phaeocystis globosa virus]
acc|REFSEQ|YP_008052546.1|REFSEQ|NC_021312|DNA-directed RNA polymerase II subunit RPB2 [Phaeocystis globosa virus]
acc|REFSEQ|YP_073534.1|REFSEQ|NC_005902|RNA polymerase beta subunit [Lymphocystis disease virus - isolate China]
acc|REFSEQ|YP_001110916.1|REFSEQ|NC_009233|DNA-directed RNA polymerase II [Heliothis virescens ascovirus 3e]
acc|REFSEQ|YP_164168.1|REFSEQ|NC_006549|DNA-directed RNA polymerase II second largest [Singapore grouper iridovirus]
acc|REFSEQ|YP_803361.1|REFSEQ|NC_008518|RNA polymerase subunit [Trichoplusia ni ascovirus 2c]
acc|REFSEQ|YP_009010932.1|REFSEQ|NC_023615|DNA-directed RNA polymerase II subunit RPB2 [Invertebrate iridescent virus 22]
acc|REFSEQ|YP_009173531.1|REFSEQ|NC_028094|DNA-directed RNA polymerase II, subunit RPB2 [Chrysochromulina ericina virus]
acc|REFSEQ|YP_009173543.1|REFSEQ|NC_028094|Intein containing DNA-directed RNA polymerase [Chrysochromulina ericina virus]
acc|REFSEQ|YP_009259433.1|REFSEQ|NC_030394|DNA-dependent RNA polymerase II second largest [Short-finned eel ranavirus]
acc|REFSEQ|YP_003969856.1|REFSEQ|NC_014637|putative DNA-directed RNA polymerase subunit [Cafeteria roenbergensis virus BV-PW1]
acc|REFSEQ|YP_004894390.1|REFSEQ|NC_016072|RNA polymerase beta subunit [Megavirus chiliensis]
acc|REFSEQ|YP_007354245.1|REFSEQ|NC_020104|intein-containing DNA-directed RNA polymerase [Acanthamoeba polyphaga moumouvirus]
acc|REFSEQ|YP_009010708.1|REFSEQ|NC_023613|DNA-directed RNA polymerase II subunit RPB2 [Invertebrate iridovirus 25]
acc|REFSEQ|YP_009163883.1|REFSEQ|NC_027778|ORF_122L [Scale drop disease virus]
acc|REFSEQ|YP_009272757.1|REFSEQ|NC_030842|DNA-dependent RNA polymerase II second largest [Ranavirus maximus]
acc|REFSEQ|YP_009342128.1|REFSEQ|NC_033423|RNA polymerase beta subunit [Lymphocystis disease virus Sa]
acc|GENBANK|UOG94281.1|GENBANK|OM876856|DNA-dependent RNA polymerase [Aureococcus anophagefferens virus]
acc|GENBANK|AYP19509.1|NEIGHBOR|MH351268|DNA-dependent RNA polymerase beta subunit [Frog virus 3]
acc|GENBANK|QPI16532.1|GENBANK|MW030575|DNA-directed RNA polymerase subunit B' [Virus NIOZ-UU159]
acc|GENBANK|QKU35550.1|GENBANK|KY523104|intein-containing DNA-directed RNA polymerase [Tupanvirus soda lake]
acc|GENBANK|AJR29205.1|GENBANK|KP266742|putative DNA dependent RNA polymerase b subunit [German gecko ranavirus]
acc|GENBANK|AJR29268.1|NEIGHBOR|KP266743|putative DNA dependent RNA polymerase b subunit [Tortoise ranavirus]
acc|GENBANK|QKG82325.1|GENBANK|MT512498|DNA-dependent RNA polymerase II second largest [Tiger frog virus]
acc|GENBANK|QKG82734.1|GENBANK|MT512502|DNA-dependent RNA polymerase II second largest [Tiger frog virus]
acc|GENBANK|QXT57843.1|GENBANK|MW582950|DNA-dependent RNA polymerase II second largest [Rhinella marina erythrocytic-like virus]
acc|GENBANK|QDY51865.1|GENBANK|MK250085|RNA polymerase Rpb2, domain 6 [Mimiviridae sp. ChoanoV1]
acc|GENBANK|QDY52415.1|GENBANK|MK250092|RNA polymerase Rpb2, domain 6 [Mimiviridae sp. ChoanoV1]
acc|GENBANK|UTE96099.1|GENBANK|MW685904|DNA-directed RNA polymerase subunit 2 MIMI-L244 [Acanthamoeba polyphaga mimivirus]
acc|GENBANK|QBK85357.1|GENBANK|MK500320|DNA-directed RNA polymerase subunit beta, [Iridovirus LCIVAC01]
acc|GENBANK|QBK87548.1|GENBANK|MK500357|DNA-directed RNA polymerase subunit beta [Marseillevirus LCMAC201]
acc|GENBANK|QBK88139.1|GENBANK|MK500376|DNA-directed RNA polymerase subunit beta [Marseillevirus LCMAC202]
acc|GENBANK|QBK88636.1|GENBANK|MK500394|DNA-directed RNA polymerase subunit beta [Mimivirus LCMiAC01]
acc|GENBANK|QBK89180.1|GENBANK|MK500408|DNA-directed RNA polymerase subunit beta [Mimivirus LCMiAC02]
acc|GENBANK|QFG73956.1|GENBANK|MN448274|RNA polymerase Rpb2, domain 6 [Megaviridae environmental sample]
acc|GENBANK|QFG74658.1|GENBANK|MN448289|RNA polymerase Rpb2, domain 6 [Megaviridae environmental sample]
acc|GENBANK|QFG75164.1|GENBANK|MN448300|RNA polymerase Rpb2, domain 6 [Megaviridae environmental sample]
acc|GENBANK|ADE34378.1|GENBANK|GQ273492|DNA-directed RNA polymerase II second largest [Turbot reddish body iridovirus]
acc|GENBANK|AFA44951.1|NEIGHBOR|JQ231222|DNA dependent RNA polymerase b subunit [common midwife toad virus -E]
acc|GENBANK|QJE49122.1|GENBANK|MK681855|putative DNA-dependent RNA polymerase b subunit [Largemouth bass virus]
acc|GENBANK|UOX61051.1|GENBANK|OM891053|DdRpII [Diabrotica toursvirus 3a]
acc|GENBANK|QCF47436.1|GENBANK|MK638670|putative DNA-dependent RNA polymerase largest [Erythrocytic necrosis virus]
acc|GENBANK|AAK84400.1|GENBANK|AF397202|LCDV orf3-like protein [Regina ranavirus]
acc|GENBANK|QEA08348.1|GENBANK|MN081869|DNA-directed RNA polymerase II subunit [Iridovirus Liz-CrIV]
acc|GENBANK|AEX61449.1|GENBANK|JN885991|DNA-directed RNA polymerase subunit 2 [Megavirus courdo7]
acc|GENBANK|AEX62991.1|GENBANK|JN885999|DNA-directed RNA polymerase subunit 2 [Moumouvirus Monve]
acc|GENBANK|AAQ09583.2|NEIGHBOR|AY653733|DNA directed RNA polymerase subunit 2 [Acanthamoeba polyphaga mimivirus]
acc|GENBANK|ANZ57073.1|GENBANK|KX574342|DNA-dependent RNA polymerase II second largest [Cod iridovirus]
acc|GENBANK|QTF49150.1|GENBANK|MW004169|DNA-directed RNA polymerase subunit 2 [Mimivirus reunion]
acc|GENBANK|AGG37914.1|NEIGHBOR|KC244182|RNA polymerase beta subunit [Rock bream iridovirus]
acc|GENBANK|ADX05878.1|GENBANK|HQ704802|putative DNA-directed RNA polymerase [Organic Lake phycodnavirus 1]
acc|GENBANK|ADX06021.1|GENBANK|HQ704802|putative DNA-directed RNA polymerase II [Organic Lake phycodnavirus 1]
acc|GENBANK|ADX06461.1|GENBANK|HQ704803|putative DNA directed RNA polymerase II [Organic Lake phycodnavirus 2]
acc|GENBANK|ADX06431.1|GENBANK|HQ704803|putative DNA-directed RNA polymerase II [Organic Lake phycodnavirus 2]
acc|GENBANK|ARF08988.1|GENBANK|KY684083|DNA-directed RNA polymerase subunit beta [Catovirus CTV1]
acc|GENBANK|ARF09480.1|GENBANK|KY684085|DNA-directed RNA polymerase subunit beta [Indivirus ILV1]
acc|GENBANK|ARF10992.1|GENBANK|KY684105|DNA-directed RNA polymerase subunit beta [Hokovirus HKV1]
acc|GENBANK|ARF11367.1|GENBANK|KY684108|DNA-directed RNA polymerase subunit beta [Klosneuvirus KNV1]
acc|GENBANK|AYV76038.1|GENBANK|MK071982|DNA-directed RNA polymerase subunit beta [Terrestrivirus sp.]
acc|GENBANK|AYV78699.1|GENBANK|MK072091|DNA-directed RNA polymerase subunit beta [Edafosvirus sp.]
acc|GENBANK|AYV79459.1|GENBANK|MK072146|intein-containing DNA-dependent RNA polymerase 2 [Faunusvirus sp.]
acc|GENBANK|AYV82195.1|GENBANK|MK072346|DNA-directed RNA polymerase subunit beta [Homavirus sp.]
acc|GENBANK|AYV84416.1|GENBANK|MK072407|intein-containing DNA-dependent RNA polymerase 2 [Hyperionvirus sp.]
acc|GENBANK|AUF82288.1|GENBANK|KY322437|DNA-directed RNA polymerase II subunit Rpb2 [Tetraselmis virus 1]
acc|GENBANK|AUF82698.1|GENBANK|KY322437|DNA-directed RNA polymerase II subunit Rpb2 [Tetraselmis virus 1]
acc|GENBANK|QOI90240.1|GENBANK|MT663534|hypothetical protein [Pyramimonas orientalis virus]
acc|GENBANK|QOI90433.1|GENBANK|MT663537|DNA-directed RNA polymerase subunit 2 [Pyramimonas orientalis virus]
acc|GENBANK|AXN91016.1|GENBANK|MG745874|putative DNA-dependent RNA polymerase subunit [Namao virus]
acc|GENBANK|AVL93672.1|GENBANK|MG807319|intein-containing DNA-directed RNA polymerase [Megavirus vitis]
acc|GENBANK|AHA42315.1|GENBANK|KF033124|DNA-directed RNA polymerase [Andrias davidianus ranavirus]
acc|GENBANK|ASH98971.1|NEIGHBOR|MF125270|DNA-dependent RNA polymerase b subunit [Common midwife toad virus]
acc|GENBANK|AHA54514.1|GENBANK|KF481685|putative DNA-directed RNA polymerase II subunit [Emiliania huxleyi virus 18]
acc|GENBANK|AHA55553.1|GENBANK|KF481687|putative DNA-directed RNA polymerase II subunit [Emiliania huxleyi virus 156]
acc|GENBANK|UUT40578.1|GENBANK|ON887238|DNA-directed RNA polymerase II second largest [carnivorous sponge associated iridovirus]
acc|GENBANK|AAY22444.1|GENBANK|DQ004274|RNA polymerase Rpb2 domain 6 [Lymphocystis disease virus 1]
acc|GENBANK|AVR29689.1|GENBANK|MG570131|DNA dependent RNA polymerase beta subunit [South American cichlid iridovirus]
acc|GENBANK|QIG60205.1|GENBANK|MN940580|intein containing DNA-directed RNA polymerase [Dishui Lake large algae virus 1]
acc|GENBANK|QIG60117.1|GENBANK|MN940580|DNA-directed RNA polymerase II subunit RPB2 [Dishui Lake large algae virus 1]
acc|GENBANK|CAZ69764.1|GENBANK|FN429076|putative DNA-directed RNA polymerase II subunit [Emiliania huxleyi virus 99B1]
acc|GENBANK|ATZ80394.1|GENBANK|MF782455|intein-containing DNA-dependent RNA polymerase 2 [Bodo saltans virus]
acc|GENBANK|AEQ60427.1|GENBANK|JF801956|DNA directed RNA polymerase subunit 2 [Acanthamoeba castellanii mamavirus]
acc|GENBANK|QCQ67777.1|GENBANK|MK637631|DNA-dependent RNA polymerase II second largest [European chub iridovirus]
acc|GENBANK|ULY68460.1|GENBANK|OL828820|DNA-directed RNA polymerase subunit Rpb2 [Chlorella virus XW01]
acc|GENBANK|AFX92379.1|NEIGHBOR|JX975216|intein-containing DNA-directed RNA polymerase [Megavirus courdo11]
acc|GENBANK|QKU34288.1|GENBANK|MF405918|intein-containing DNA-directed RNA polymerase [Tupanvirus deep ocean]
