LENGTH	1305
LCA	cellular organisms::Eukaryota
NBSEQ	33
KEYWORDS:
domain	63
integrase	61
gag	59
dna	33
rna	33
dependent	33
polymerase	33
reverse	33
transcriptase	33
core	31
pre	30
type	29
polypeptide	29
ltr	29
copia	29
zinc	13
knuckle	13
unknown	2
function	2
duf4219	1
duf6598	1
KEYWORDS FROM SEQUENCES:
polyprotein	22
pol	15
gag	13
putative	7
protein	6
glycine	5
max	5
retrotransposon	5
zea	4
mays	4
oryza	3
copia	3
arabidopsis	3
thaliana	3
edulis	3
phyllostachys	3
like	2
integrase	2
vulgaris	2
sativa	2
dioica	2
phanerochaete	2
chrysosporium	2
australiensis	1
type	1
japonicus	1
group	1
beta	1
japonica	1
protease	1
medicago	1
truncatula	1
brassica	1
and	1
persica	1
botrytis	1
prunus	1
helianthus	1
ipomoea	1
lotus	1
batatas	1
solanum	1
annuus	1
oleracea	1
gossypium	1
barbadense	1
var	1
rnaseh	1
phaseolus	1
fragaria	1
momordica	1
ananassa	1
chilense	1
bryonia	1
ty1	1
SEQUENCES:
acc|GENBANK|BAB03249.1|GENBANK|AB046118|polyprotein [Oryza sativa]
acc|GENBANK|BAD34493.1|GENBANK|AB162659|Gag-Pol [Ipomoea batatas]
acc|GENBANK|BAG72096.1|GENBANK|AB370254|Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
acc|GENBANK|AAC49502.1|GENBANK|U68408|Pol [Zea mays]
acc|GENBANK|CAA31653.1|GENBANK|X13291|polyprotein [Arabidopsis thaliana]
acc|GENBANK|BAA22288.1|GENBANK|D85597|polyprotein [Oryza australiensis]
acc|GENBANK|AAZ28935.1|GENBANK|DQ097838|polyprotein [Phanerochaete chrysosporium RP-78]
acc|GENBANK|AAZ28937.1|GENBANK|DQ097840|polyprotein [Phanerochaete chrysosporium RP-78]
acc|GENBANK|ABH07409.1|GENBANK|DQ482460|putative pol polyprotein [Brassica oleracea var. botrytis]
acc|GENBANK|ABH08430.1|GENBANK|DQ851167|putative integrase [Beta vulgaris]
acc|GENBANK|ACN78973.1|GENBANK|FJ225394|copia-type polyprotein [Glycine max]
acc|GENBANK|ACL97383.1|GENBANK|FJ544851|Gag-Pol polyprotein [Medicago truncatula]
acc|GENBANK|ACL97387.1|GENBANK|FJ544857|Gag-Pol polyprotein [Lotus japonicus]
acc|GENBANK|ACS74199.1|GENBANK|FJ871121|putative gag-pol polyprotein [Fragaria x ananassa]
acc|GENBANK|CAX68207.1|GENBANK|FN298618|Copia-like retrotransposon [Helianthus annuus]
acc|GENBANK|ADB85411.1|GENBANK|GQ252886|putative retrotransposon protein [Phyllostachys edulis]
acc|GENBANK|ADB85429.1|GENBANK|GQ252887|putative retrotransposon protein [Phyllostachys edulis]
acc|GENBANK|ADB85430.1|GENBANK|GQ252887|putative retrotransposon protein [Phyllostachys edulis]
acc|GENBANK|ADJ18449.1|GENBANK|HM365926|gag/pol protein [Bryonia dioica]
acc|GENBANK|AGW47867.1|GENBANK|KF303287|polyprotein [Phaseolus vulgaris]
acc|GENBANK|AIC77183.1|GENBANK|KF740825|polyprotein [Gossypium barbadense]
acc|GENBANK|AHL77759.1|GENBANK|KJ150676|polyprotein [Prunus persica]
acc|GENBANK|AMY96445.1|GENBANK|KU052576|gag/pol protein [Momordica dioica]
acc|GENBANK|AAG52949.1|GENBANK|AY016208|gag/pol polyprotein [Arabidopsis thaliana]
acc|GENBANK|AAO73521.1|GENBANK|AY205608|gag-pol polyprotein [Glycine max]
acc|GENBANK|AAO73523.1|GENBANK|AY205609|gag-pol polyprotein [Glycine max]
acc|GENBANK|AAO73529.1|GENBANK|AY205612|gag-pol polyprotein [Glycine max]
acc|GENBANK|AAD12997.1|GENBANK|AF082133|gag-pol polyprotein [Zea mays]
acc|GENBANK|AAD12998.1|GENBANK|AF082134|pol polyprotein [Zea mays]
acc|GENBANK|AAK29467.1|GENBANK|AF279585|polyprotein-like [Solanum chilense]
acc|GENBANK|AAM22635.1|GENBANK|AF434192|Gag and Pol [Zea mays]
acc|GENBANK|CAC37622.1|GENBANK|AJ292423|polyprotein [Arabidopsis thaliana]
acc|GENBANK|USI00829.1|GENBANK|ON753198|retrotransposon protein, putative Ty1-copia [Oryza sativa Japonica Group]
