LENGTH	4076
LCA	Viruses::Riboviria::Orthornavirae::Pisuviricota::Pisoniviricetes::Nidovirales::Cornidovirineae::Coronaviridae
NBSEQ	102
KEYWORDS:
coronavirus	1251
replicase	947
terminal	508
nsp2	204
nsp4	202
like	102
domain	102
peptidase	102
endopeptidase	102
macro	102
nsp3	102
papain	102
c30	102
nsp9	101
nsp8	101
nsp6	101
protein	100
rna	100
synthesis	100
nsp10	100
nsp7	100
polyprotein	36
from	36
nsp1	36
term	36
KEYWORDS FROM SEQUENCES:
coronavirus	77
orf1a	68
polyprotein	54
bat	29
protein	25
feline	22
alphacoronavirus	14
replicase	12
human	12
229e	11
virus	10
porcine	10
diarrhea	10
related	8
epidemic	8
nl63	8
myotis	5
ferret	5
rhinolophus	4
mink	4
swine	3
pp1a	3
hku32	3
rodent	2
canine	2
strain	2
respiratory	2
transmissible	2
gastroenteritis	2
tadarida	2
brasiliensis	2
enteric	2
syndrome	2
acute	2
miniopterus	2
ricketti	2
hku8	2
hku10	2
the	1
china	1
2006	1
usa	1
mouse	1
2016	1
pika	1
hipposideros	1
135	1
orf1b	1
davidii	1
tylonycteris	1
2020	1
310	1
robustula	1
uu22	1
uu18	1
uu24	1
plateatu	1
p83	1
accov	1
jc34	1
wd1127	1
cdphe15	1
ukrn3	1
uu20	1
minacovirus	1
nld	1
nt_4	1
fievel	1
uu47	1
cleaved	1
yield	1
hku2	1
wd1133	1
polyproteine	1
SEQUENCES:
acc|GENBANK|WMT38783.1|GENBANK|OR418363|polyprotein 1a [Porcine epidemic diarrhea virus]
acc|GENBANK|WMT38789.1|GENBANK|OR418364|polyprotein 1a [Porcine epidemic diarrhea virus]
acc|GENBANK|WMI31308.1|GENBANK|OR427311|orf1a polyprotein [Bat coronavirus]
acc|GENBANK|URY50787.1|GENBANK|OM830318|replicase 1a [Porcine respiratory coronavirus 135]
acc|GENBANK|URY50795.1|GENBANK|OM830319|replicase 1a [Porcine respiratory coronavirus 310]
acc|GENBANK|UJH59858.1|GENBANK|MW587035|ORF1a polyprotein [Human coronavirus 229E]
acc|GENBANK|UJH59865.1|GENBANK|MW587036|ORF1a polyprotein [Human coronavirus 229E]
acc|GENBANK|UJH94697.1|GENBANK|MW587039|ORF1a protein [Human coronavirus NL63]
acc|GENBANK|QVQ56629.1|GENBANK|MW591993|ORF1b [Canine coronavirus]
acc|GENBANK|UUT43918.1|GENBANK|ON911569|ORF1a polyprotein [Swine acute diarrhea syndrome coronavirus]
acc|GENBANK|QCW07221.1|NEIGHBOR|MK796238|polyprotein [Porcine epidemic diarrhea virus]
acc|GENBANK|AUG98117.1|NEIGHBOR|KY566209|polyprotein 1a [Feline coronavirus]
acc|GENBANK|AGT21358.1|NEIGHBOR|KF514432|replicase polyprotein 1a [Human coronavirus 229E]
acc|GENBANK|UUT43638.1|GENBANK|OK017907|ORF1a [Alphacoronavirus sp.]
acc|GENBANK|QED88011.1|NEIGHBOR|MK334043|orf1a protein [Human coronavirus NL63]
acc|GENBANK|QED88025.1|NEIGHBOR|MK334045|orf1a protein [Human coronavirus NL63]
acc|GENBANK|QED88032.1|NEIGHBOR|MK334046|orf1a protein [Human coronavirus NL63]
acc|GENBANK|ALJ99892.1|NEIGHBOR|KT253269|orf1a [229E-related bat coronavirus]
acc|GENBANK|ALJ99894.1|NEIGHBOR|KT253271|orf1a [229E-related bat coronavirus]
acc|GENBANK|ALJ99895.1|NEIGHBOR|KT253272|orf1a [229E-related bat coronavirus]
acc|GENBANK|AAY32595.1|NEIGHBOR|DQ010921|polyprotein 1a [Feline coronavirus]
acc|GENBANK|AYF53091.1|GENBANK|MH817484|polyprotein 1a [Feline alphacoronavirus 1]
acc|GENBANK|BDU78976.1|GENBANK|LC742526|polyprotein 1a [Feline coronavirus]
acc|GENBANK|ABD58989.1|GENBANK|DQ390461|replicase 1a [Transmissible gastroenteritis virus]
acc|GENBANK|WGL50251.1|GENBANK|OQ378935|ORF1a protein [Porcine epidemic diarrhea virus]
acc|GENBANK|WAB00016.1|GENBANK|OP919651|ORF1a protein [Bat coronavirus]
acc|GENBANK|UUT43912.1|GENBANK|ON745166|ORF1a polyprotein [Tylonycteris robustula coronavirus]
acc|GENBANK|AFH58023.1|NEIGHBOR|JN634064|1a polyprotein [Feline coronavirus]
acc|GENBANK|ASR18936.1|NEIGHBOR|KX512809|pp1a [Ferret enteric coronavirus]
acc|GENBANK|ADC35459.1|NEIGHBOR|GU553361|orf1a polyprotein [Feline coronavirus UU22]
acc|GENBANK|ADL71453.1|NEIGHBOR|HQ012368|polyprotein orf1a [Feline coronavirus UU18]
acc|GENBANK|ADL71474.1|NEIGHBOR|HQ012370|polyprotein orf1a [Feline coronavirus UU24]
acc|GENBANK|QZL09680.1|GENBANK|MZ577265|ORF1a [plateatu pika coronavirus P83]
acc|GENBANK|QCC26593.1|NEIGHBOR|MK140813|polyprotein [Porcine epidemic diarrhea virus]
acc|REFSEQ|YP_009199240.1|REFSEQ|NC_028806|replicase polyprotein 1a [Swine enteric coronavirus]
acc|REFSEQ|YP_009328934.1|REFSEQ|NC_032107|ORF1a protein [NL63-related bat coronavirus]
acc|REFSEQ|YP_009380519.1|REFSEQ|NC_034972|orf1a polyprotein [Coronavirus AcCoV-JC34]
acc|REFSEQ|YP_009019181.1|REFSEQ|NC_023760|orf1a polyprotein [Mink coronavirus strain WD1127]
acc|REFSEQ|YP_008439201.1|REFSEQ|NC_022103|replicase polyprotein 1a [Bat coronavirus CDPHE15/USA/2006]
acc|REFSEQ|YP_001718604.1|REFSEQ|NC_010437|ORF1a polyprotein [Bat coronavirus 1A]
acc|GENBANK|QBG64654.1|GENBANK|MK163627|pp1a [Alphacoronavirus UKRn3]
acc|GENBANK|WKR38762.1|GENBANK|OR266946|replicase polyprotein 1a [Human coronavirus 229E]
acc|GENBANK|WKR38806.1|GENBANK|OR266952|replicase polyprotein 1a [Human coronavirus 229E]
acc|GENBANK|AGW80931.1|NEIGHBOR|KF293664|replicase polyprotein 1a [Human coronavirus 229E]
acc|GENBANK|QXP00782.1|GENBANK|MW802582|ORF1a polyprotein [Rodent coronavirus]
acc|GENBANK|ADO39837.1|NEIGHBOR|HQ392471|polyprotein orf1a [Feline coronavirus UU20]
acc|GENBANK|ASV64293.1|NEIGHBOR|KX900395|replicase 1a [Transmissible gastroenteritis virus]
acc|GENBANK|QDM36986.1|NEIGHBOR|MN165107|polyprotein 1a [Feline coronavirus]
acc|GENBANK|QBP43255.1|NEIGHBOR|MG916901|ORF1a [Bat coronavirus]
acc|GENBANK|QBP43267.1|NEIGHBOR|MG916902|ORF1a [Bat coronavirus]
acc|GENBANK|QBP43289.1|NEIGHBOR|MG916904|ORF1a [Bat coronavirus]
acc|GENBANK|AYH64860.2|GENBANK|MG923573|polyprotein [Bat alphacoronavirus]
acc|GENBANK|AGT51336.1|NEIGHBOR|KF530106|replicase polyprotein 1a [Human coronavirus NL63]
acc|GENBANK|AGT52078.1|NEIGHBOR|KF530123|ORF1a polyprotein [Feline coronavirus]
acc|GENBANK|ASU62486.1|NEIGHBOR|KX722529|polyprotein 1a [Feline coronavirus]
acc|GENBANK|ASU62497.1|NEIGHBOR|KX722530|polyprotein 1a [Feline coronavirus]
acc|GENBANK|ASB15737.1|NEIGHBOR|KY063616|ORF1A [Canine coronavirus]
acc|GENBANK|APD51490.1|NEIGHBOR|KY073746|ORF1a protein [NL63-related bat coronavirus]
acc|GENBANK|APD51498.1|NEIGHBOR|KY073747|ORF1a protein [229E-related bat coronavirus]
acc|GENBANK|QPP46978.1|GENBANK|MW248736|orf1a polyprotein [Minacovirus mink/NLD/2020/NT_4]
acc|GENBANK|UHL62015.1|GENBANK|OK655840|pp1a [Fievel mouse coronavirus]
acc|GENBANK|AEK25509.1|NEIGHBOR|JN183882|polyprotein orf1a [Feline coronavirus UU47]
acc|GENBANK|AHZ94880.1|NEIGHBOR|KJ778615|polyprotein [Porcine epidemic diarrhea virus]
acc|GENBANK|UZV41957.1|GENBANK|ON595856|ORF1a [Feline coronavirus]
acc|GENBANK|UZV41977.1|GENBANK|ON595858|ORF1a [Feline coronavirus]
acc|GENBANK|UZV42010.1|GENBANK|ON595863|ORF1a [Feline coronavirus]
acc|GENBANK|UZV42077.1|GENBANK|ON595870|ORF1a [Feline coronavirus]
acc|GENBANK|ACA52155.1|NEIGHBOR|EU420137|ORF1a polyprotein [Bat coronavirus 1B]
acc|GENBANK|UUX91031.1|GENBANK|OK287352|ORF1a polyprotein [Alphacoronavirus sp.]
acc|GENBANK|QRN75108.1|NEIGHBOR|MW030109|polyprotein 1b [Feline coronavirus]
acc|GENBANK|QOP39312.1|GENBANK|MW039392|replicase polyprotein 1a [Human coronavirus 229E]
acc|GENBANK|UZK98245.1|GENBANK|OP700657|ORF1a polyprotein [Tadarida brasiliensis bat alphacoronavirus 2]
acc|GENBANK|UZK98259.1|GENBANK|OP715781|ORF1a polyprotein [Tadarida brasiliensis bat alphacoronavirus 1]
acc|GENBANK|WAB23833.1|GENBANK|OP933726|ORF1a polyprotein is cleaved to yield the [Ferret coronavirus]
acc|GENBANK|WCZ55856.1|GENBANK|OQ297710|ORF1a protein [Miniopterus bat coronavirus HKU8]
acc|GENBANK|WCZ55863.1|GENBANK|OQ297711|ORF1a protein [Myotis bat alphacoronavirus]
acc|GENBANK|WCZ55868.1|GENBANK|OQ297712|ORF1a protein [Bat coronavirus HKU10]
acc|GENBANK|WCZ55875.1|GENBANK|OQ297713|ORF1a protein [Myotis davidii alphacoronavirus]
acc|GENBANK|WCZ55883.1|GENBANK|OQ297714|ORF1a protein [Myotis ricketti alphacoronavirus]
acc|GENBANK|WCZ55891.1|GENBANK|OQ297715|ORF1a protein [Miniopterus bat coronavirus HKU8]
acc|GENBANK|WCZ55898.1|GENBANK|OQ297716|ORF1a protein [Rodent coronavirus]
acc|GENBANK|WCZ55908.1|GENBANK|OQ297717|ORF1a protein [Myotis ricketti alphacoronavirus]
acc|GENBANK|WCZ55916.1|GENBANK|OQ297718|ORF1a protein [Swine acute diarrhea syndrome related coronavirus]
acc|GENBANK|WCZ55923.1|GENBANK|OQ297719|ORF1a protein [Hipposideros bat coronavirus]
acc|GENBANK|WCZ55930.1|GENBANK|OQ297720|ORF1a protein [Rhinolophus bat coronavirus HKU32]
acc|GENBANK|WCZ55939.1|GENBANK|OQ297721|ORF1a protein [Rhinolophus bat coronavirus HKU32]
acc|GENBANK|WCZ55949.1|GENBANK|OQ297722|ORF1a protein [Bat coronavirus HKU10]
acc|GENBANK|WCZ55963.1|GENBANK|OQ297724|ORF1a protein [Rhinolophus bat coronavirus HKU32]
acc|GENBANK|WCZ56004.1|GENBANK|OQ297729|ORF1a protein [Myotis bat alphacoronavirus]
acc|GENBANK|AXE71623.1|NEIGHBOR|MG893511|polyprotein 1a [Feline coronavirus]
acc|GENBANK|WDE20348.1|GENBANK|OQ405400|orf1a polyprotein [Alphacoronavirus sp.]
acc|REFSEQ|YP_009824966.1|REFSEQ|NC_048216|ORF1a protein [NL63-related bat coronavirus]
acc|REFSEQ|YP_001552235.1|REFSEQ|NC_009988|ORF1a polyprotein [Rhinolophus bat coronavirus HKU2]
acc|REFSEQ|YP_009256196.1|REFSEQ|NC_030292|ORF1a polyprotein [Ferret coronavirus]
acc|GENBANK|AVY53335.1|GENBANK|MF113046|ORF1a [Alphacoronavirus Mink/China/1/2016]
acc|GENBANK|ASB16885.1|NEIGHBOR|KY292377|polyprotein 1a [Feline coronavirus]
acc|GENBANK|ADI80521.1|GENBANK|HM245926|orf1a polyprotein [Mink coronavirus strain WD1133]
acc|GENBANK|ABI14447.1|NEIGHBOR|DQ848678|polyprotein 1a [Feline coronavirus]
acc|GENBANK|AVU05492.1|NEIGHBOR|MH013465|polyprotein ORF1a [Porcine epidemic diarrhea virus]
acc|GENBANK|BAV31347.1|NEIGHBOR|LC119077|ORF1a polyprotein [Ferret coronavirus]
acc|GENBANK|BBA21166.1|NEIGHBOR|LC215871|ORF1a polyproteine [Ferret coronavirus]
acc|GENBANK|UAB59970.1|GENBANK|MZ325486|polyprotein orf1a [Porcine epidemic diarrhea virus]
