LENGTH	1197
LCA	Viruses::Riboviria::Pararnavirae::Artverviricota::Revtraviricetes::Ortervirales::Retroviridae::Orthoretrovirinae
NBSEQ	127
KEYWORDS:
domain	406
reverse	287
transcriptase	287
rnase	287
like	243
integrase	216
zinc	190
found	190
finger	142
dna	140
core	131
virus	95
murine	95
terminal	95
leukemia	95
mlv	95
h2c2	94
rna	92
dependent	92
polymerase	92
aspartyl	85
protease	85
protein	82
retroviral	72
binding	71
gag	62
probable	48
p30	33
shell	33
polyprotein	31
matrix	30
p15	30
knuckle	25
coat	20
inner	19
p12	19
putative	10
env	1
KEYWORDS FROM SEQUENCES:
pol	94
virus	58
polyprotein	51
protein	46
leukemia	36
gag	33
retrovirus	27
murine	23
endogenous	19
precursor	15
pro	15
porcine	13
mus	12
polymerase	11
putative	10
musculus	10
feline	9
gammaretrovirus	9
mulv	9
reverse	8
transcriptase	8
truncated	7
sus	7
scrofa	7
xenotropic	7
bat	6
related	6
felis	6
integrase	6
reticuloendotheliosis	6
catus	5
odocoileus	5
hemionus	5
recombinant	4
friend	3
koala	3
gibbon	3
ape	3
ralv	3
fusion	2
monkey	2
endonuclease	2
epidermal	2
sarcoma	2
erv	2
woolly	2
prexmrv	2
castaneus	2
walleye	2
hyperplasia	2
hypothetical	1
like	1
associated	1
human	1
rhinolophus	1
rat	1
mink	1
multiple	1
strain	1
envelope	1
homo	1
sapiens	1
megaderma	1
spleen	1
necrosis	1
baboon	1
cell	1
flying	1
fox	1
ferrumequinum	1
mouse	1
409	1
rhinella	1
marina	1
protease	1
hipposideros	1
enhydra	1
lutris	1
gpr80	1
syncytial	1
nereis	1
xmrv	1
merv	1
vp62	1
end	1
391	1
476	1
hervey	1
pteropid	1
larvatus	1
cervicolor	1
popaeus	1
sclerosis	1
hcml	1
arv	1
rd114	1
amphotropic	1
galidia	1
echidna	1
herv	1
silvestris	1
dunni	1
chick	1
lyra	1
focus	1
forming	1
caroli	1
SEQUENCES:
acc|GENBANK|ABS85542.1|GENBANK|EU035300|putative gag-pro-pol polyprotein [Xenotropic murine leukemia virus]
acc|GENBANK|AAA18407.1|GENBANK|AH000833|pol protein [Mus musculus]
acc|GENBANK|ARB03462.1|NEIGHBOR|KY574504|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|ARB03474.1|NEIGHBOR|KY574508|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|ARB03480.1|NEIGHBOR|KY574510|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AUS82407.1|NEIGHBOR|KY581581|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|AKA58521.1|GENBANK|KP261824|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AOT85955.1|GENBANK|KX018258|gag-pol precursor polyprotein [Enhydra lutris nereis]
acc|GENBANK|ATQ39201.1|GENBANK|KY352351|protease polymerase [Sus scrofa]
acc|GENBANK|BAQ55417.1|GENBANK|LC005746|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BAQ55420.1|GENBANK|LC005749|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|QQH14880.1|GENBANK|MT648453|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14882.1|GENBANK|MT648455|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14884.1|GENBANK|MT648457|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14885.1|GENBANK|MT648458|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14887.1|GENBANK|MT648460|pol protein [Bat gammaretrovirus]
acc|GENBANK|AMK06426.1|NEIGHBOR|KU324805|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|QLI47671.1|GENBANK|MT138120|pol polyprotein [Reticuloendotheliosis virus]
acc|GENBANK|AEA72809.1|NEIGHBOR|JF714652|putative gag-pol polyprotein [XMRV-like mouse endogenous retrovirus mERV-XL]
acc|GENBANK|ABD49687.1|NEIGHBOR|DQ399707|putative gag-pro-pol polyprotein [Xenotropic MuLV-related virus VP62]
acc|GENBANK|BAM33593.1|GENBANK|AB674441|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BAM33594.1|GENBANK|AB674443|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BAM33596.1|GENBANK|AB674444|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|AAC78249.1|GENBANK|M77194|polymerase [Rat leukemia virus]
acc|GENBANK|AAA79247.1|NEIGHBOR|M87550|putative reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAA46477.1|NEIGHBOR|M93134|pol protein [Friend murine leukemia virus]
acc|GENBANK|BAM67146.1|GENBANK|AB721500|gag-pol precursor polyprotein [Koala retrovirus]
acc|GENBANK|AAC80264.1|NEIGHBOR|U60065|pol polyprotein [Gibbon ape leukemia virus]
acc|GENBANK|AAC58562.1|GENBANK|U87552|integrase [Murine leukemia virus]
acc|GENBANK|CAA25685.1|GENBANK|X01455|C end of pol protein (reverse transcriptase) [Reticuloendotheliosis virus]
acc|GENBANK|CAA28802.1|GENBANK|X05165|endonuclease (391 AA) [Murine leukemia virus]
acc|GENBANK|CAA31582.1|GENBANK|X13194|pol endonuclease [Gibbon ape leukemia virus]
acc|GENBANK|CAA33367.1|GENBANK|X15311|reverse transcriptase (476 AA) [Woolly monkey sarcoma virus]
acc|GENBANK|CAA55543.1|GENBANK|X78945|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AMK06435.1|GENBANK|KU324808|pol [Mus musculus musculus]
acc|GENBANK|ALV83306.1|NEIGHBOR|KT724049|pol polyprotein [Gibbon ape leukemia virus]
acc|GENBANK|QJT93247.1|GENBANK|MN413610|pol protein [Hervey pteropid gammaretrovirus]
acc|GENBANK|QJT93256.1|GENBANK|MN413613|pol protein [Hipposideros larvatus gammaretrovirus]
acc|GENBANK|AAT77167.1|NEIGHBOR|AY570980|pol protein [Porcine endogenous retrovirus C/A]
acc|GENBANK|AAK16155.1|GENBANK|AF327437|pol polyprotein [Mus cervicolor popaeus endogenous virus]
acc|GENBANK|BAP91048.1|NEIGHBOR|AB979448|Gag-Pol precursor polyprotein [Baboon endogenous virus strain M7]
acc|GENBANK|AAB58752.1|GENBANK|AF003736|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAB66528.1|GENBANK|AF009668|polyprotein [Multiple sclerosis associated retrovirus]
acc|GENBANK|QDH76136.1|GENBANK|MK948412|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AAP06677.1|GENBANK|AY208746|pol protein [Human endogenous retrovirus HCML-ARV]
acc|GENBANK|AAO46143.1|GENBANK|AY236757|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|AAO46146.1|GENBANK|AY236759|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|AAO46150.1|GENBANK|AY236761|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|QDA02050.1|GENBANK|MK040728|pol protein [Flying-fox retrovirus]
acc|REFSEQ|YP_001497148.1|REFSEQ|NC_009889|gag-pol precursor polyprotein [RD114 retrovirus]
acc|REFSEQ|YP_001165470.1|REFSEQ|NC_009424|hypothetical protein [Woolly monkey sarcoma virus]
acc|REFSEQ|NP_047255.1|REFSEQ|NC_001940|Gag-Pro-Pol precursor polyprotein gPr80 [Feline leukemia virus]
acc|REFSEQ|YP_009513211.1|REFSEQ|NC_039228|pol protein [Koala retrovirus]
acc|GENBANK|BAA22064.1|NEIGHBOR|D88386|gag-pol polyprotein (precursor protein) [Friend murine leukemia virus]
acc|GENBANK|BAK41647.1|GENBANK|AB635620|integrase [Feline leukemia virus]
acc|GENBANK|BAM45657.1|GENBANK|AB672612|pol polyprotein [Feline leukemia virus]
acc|GENBANK|AAO61197.1|NEIGHBOR|AF411814|gag-pro-pol polyprotein [Amphotropic murine leukemia virus]
acc|GENBANK|AAL87853.1|GENBANK|AF435966|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AAL87856.1|GENBANK|AF435967|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AGV92853.1|GENBANK|KF313135|polymerase [Galidia ERV]
acc|GENBANK|AGV92856.1|GENBANK|KF313136|polymerase [Echidna ERV]
acc|GENBANK|QAS62334.1|GENBANK|MH198419|truncated pol protein [Sus scrofa]
acc|GENBANK|ADU55769.1|GENBANK|HQ385294|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|ADU55770.1|GENBANK|HQ385295|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|ADU55772.1|GENBANK|HQ385300|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|AEF12607.1|GENBANK|HQ540592|pol protein [Porcine endogenous retrovirus A]
acc|GENBANK|AEF12610.1|GENBANK|HQ540593|pol protein [Porcine endogenous retrovirus B]
acc|GENBANK|AEF12615.1|GENBANK|HQ540595|pol protein [Porcine endogenous retrovirus B]
acc|GENBANK|AAC52075.1|GENBANK|AF026246|HERV-E integrase [Homo sapiens]
acc|GENBANK|BBI55082.1|NEIGHBOR|LC462187|gag-pol precursor polyprotein [Feline leukemia virus]
acc|GENBANK|BAD52413.1|NEIGHBOR|AB187565|POL polyprotein precursor [Murine leukemia virus]
acc|GENBANK|AYG96643.1|GENBANK|MG020273|gag-pro-pol protein [Feline leukemia virus]
acc|GENBANK|AGU99874.1|GENBANK|KF584029|gag-pro-pol polyprotein [PreXMRV-1/PreXMRV-2 recombinant]
acc|GENBANK|CAB38566.1|GENBANK|X51929|polyprotein [Felis silvestris]
acc|GENBANK|AAN46639.1|GENBANK|AY140896|truncated pol/envelope fusion protein [Mus musculus]
acc|GENBANK|AAO37227.1|GENBANK|AY219536|integrase [Mus musculus]
acc|GENBANK|AAO37253.1|GENBANK|AY219549|truncated integrase [Mus musculus]
acc|GENBANK|AAY27069.1|GENBANK|AY999005|truncated polyprotein [Mus musculus castaneus]
acc|GENBANK|ACD35951.1|NEIGHBOR|EU523109|pol polyprotein [Porcine endogenous retrovirus]
acc|GENBANK|AAC31805.1|NEIGHBOR|AF053745|pol polyprotein [Mus dunni endogenous virus]
acc|GENBANK|AAA39757.1|GENBANK|M19005|pol protein [Mus musculus]
acc|GENBANK|ASU50141.1|NEIGHBOR|KY484771|gag-pol polyprotein [Porcine endogenous retrovirus A]
acc|GENBANK|AFA52559.1|GENBANK|JQ303225|pol protein [Rhinolophus ferrumequinum retrovirus]
acc|GENBANK|AYG96584.1|NEIGHBOR|MF681667|gag-pro-pol polyprotein [Feline leukemia virus]
acc|GENBANK|AYG96594.1|NEIGHBOR|MF681672|gag-pro-pol polyprotein [Feline leukemia virus]
acc|GENBANK|AAM29194.1|GENBANK|AY099324|gag-pol polyprotein [Porcine endogenous retrovirus B]
acc|GENBANK|AAR12481.1|GENBANK|AY349136|truncated gag-pol fusion protein [Murine leukemia virus]
acc|GENBANK|AAA92679.1|NEIGHBOR|U13766|gag-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AAK50381.1|GENBANK|U43202|pol precursor protein [Murine leukemia virus]
acc|GENBANK|AAC55819.1|GENBANK|U51729|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAC55820.1|GENBANK|U51730|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|ADG27337.1|GENBANK|GU980187|truncated pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AHY24815.1|NEIGHBOR|KF786285|pol protein [Koala retrovirus]
acc|GENBANK|QOS45062.1|GENBANK|MT984603|Pro-Pol [Sus scrofa]
acc|GENBANK|WCB86803.1|GENBANK|MZ964580|gag-pro-pol precursor [Feline leukemia virus]
acc|GENBANK|UUG66872.1|GENBANK|OP081083|pol protein [Gammaretrovirus sp.]
acc|GENBANK|BAB47169.1|GENBANK|AB050721|polymerase [Mus musculus castaneus]
acc|GENBANK|AMZ03629.1|GENBANK|KU981174|pol [Reticuloendotheliosis virus]
acc|GENBANK|AEW89632.1|GENBANK|JN592050|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49861.1|GENBANK|KC934943|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49862.1|GENBANK|KC934944|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49864.1|GENBANK|KC934946|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|CCA30551.1|GENBANK|FR837946|gag-pro-pol polyprotein [Xenotropic MuLV-related virus]
acc|GENBANK|ABC26827.1|GENBANK|DQ237902|polymerase [Spleen necrosis virus]
acc|GENBANK|ABC26829.1|GENBANK|DQ237906|polymerase [Reticuloendotheliosis virus]
acc|GENBANK|ABC26830.1|GENBANK|DQ237908|polymerase [Reticuloendotheliosis virus]
acc|GENBANK|ACF20333.1|GENBANK|EU789636|putative gag-pol polyprotein [Sus scrofa]
acc|REFSEQ|YP_009665179.1|REFSEQ|NC_043194|pol polyprotein [Walleye epidermal hyperplasia virus 1]
acc|REFSEQ|YP_009665180.1|REFSEQ|NC_043195|pol polyprotein [Walleye epidermal hyperplasia virus 2]
acc|REFSEQ|YP_009665181.1|REFSEQ|NC_043196|polymerase [Chick syncytial virus]
acc|GENBANK|CAA36849.1|GENBANK|X52622|integrase (409 AA) [Mus musculus]
acc|GENBANK|AFM52260.1|GENBANK|JQ951956|Pol [Megaderma lyra retrovirus]
acc|GENBANK|ACY30461.1|GENBANK|GQ497345|putative gag polyprotein [Xenotropic MuLV-related virus]
acc|GENBANK|AAG10201.1|GENBANK|AF290913|polyprotein [Murine leukemia virus]
acc|GENBANK|AWS20967.1|GENBANK|MG981046|pol protein [Rhinella marina endogenous retrovirus]
acc|GENBANK|CAC82505.2|GENBANK|AJ279057|Pol protein [Porcine endogenous retrovirus]
acc|GENBANK|CAC39626.1|GENBANK|AJ293657|polymerase [Porcine endogenous retrovirus C]
acc|GENBANK|CAJ76246.1|GENBANK|AM229311|polyprotein [Sus scrofa]
acc|GENBANK|CAJ76250.1|GENBANK|AM229313|polyprotein [Sus scrofa]
acc|GENBANK|CAJ76251.1|GENBANK|AM229313|truncated POL protein [Sus scrofa]
acc|GENBANK|AAV68488.2|NEIGHBOR|AY818896|gag-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AGN73375.1|GENBANK|KF170221|pol protein [Bat gammaretrovirus]
acc|GENBANK|UWV21323.1|GENBANK|MW839565|pol protein [Feline leukemia virus]
acc|GENBANK|AAD30536.1|GENBANK|AF133256|reverse transcriptase [Friend mink cell focus-forming virus]
acc|GENBANK|AAD34536.1|GENBANK|AF136491|polymerase [Murine leukemia virus]
acc|GENBANK|AAA46527.1|GENBANK|M10100|pol protein [Murine leukemia virus]
acc|GENBANK|AGP25480.1|GENBANK|KC460271|pol protein [Mus caroli]
