LENGTH	407
LCA	Viruses::ssRNA viruses::ssRNA positive-strand viruses, no DNA stage::Nidovirales::Cornidovirineae::Coronaviridae::Coronavirinae
NBSEQ	172
KEYWORDS:
nucleocapsid	146
protein	129
coronavirus	92
virus	69
Infectious	59
bronchitis	59
phosphoprotein	18
Bat	17
respiratory	12
Middle	11
East	11
related	11
syndrome	11
Human	9
Bovine	8
SARS	8
bat	7
HKU9	7
putative	6
Murine	6
hepatitis	6
nucleoprotein	6
Porcine	5
Rodent	5
Duck	5
OC43	5
Goose	4
Rousettus	4
Betacoronavirus	4
hemagglutinating	4
encephalomyelitis	4
2012	3
betacoronavirus	3
capsid	2
2008	2
2011	2
Bean	2
2005	2
Pigeon	2
Rabbit	2
goose	2
Mallard	2
HKU1	2
HKU14	2
UAE	2
like	1
Beluga	1
whale	1
strain	1
structural	1
Eidolon	1
Canine	1
Philippines	1
2004	1
Common	1
2006	1
Turkey	1
Falcon	1
Equine	1
Guinea	1
fowl	1
rat	1
DEU	1
Kenya	1
deltacoronavirus	1
White	1
England	1
133	1
Quail	1
robin	1
CoV	1
SC2013	1
Coronavirus	1
GfCoV	1
SW1	1
TJ01	1
HKU24	1
Hypsugo	1
HKU25	1
Zaria	1
HKU4	1
HKU5	1
Longquan	1
Neoromicia	1
PML	1
PHE1	1
RSA	1
Erinaceus	1
VMC	1
Zhejiang2013	1
BM48	1
BGR	1
KY24	1
heron	1
moorhen	1
BetaCoV	1
CUHK	1
EMC	1
796	1
BtCoV	1
BtVs	1
eye	1
Puffinosis	1
Diliman1525G2	1
Rp1	1
Qatar	1
Rm1	1
HKU27	1
HKU30	1
Bulbul	1
HKU11	1
HKU16	1
Night	1
HKU19	1
Wigeon	1
HKU20	1
HKU21	1
Magpie	1
HKU18	1
Thrush	1
HKU12	1
600	1
Munia	1
HKU13	1
3514	1
xw002	1
cw049	1
cw037	1
SEQUENCES:
acc|GENBANK|ADI59793.1|NEIGHBOR|GU593319|structural protein N [Murine hepatitis virus]
acc|GENBANK|ABM68080.1|GENBANK|EF185916|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|ABM66808.1|GENBANK|EF193073|nucleocapsid protein [Bovine coronavirus]
acc|GENBANK|ABM92863.1|GENBANK|EF199653|nucleocapsid protein [SARS coronavirus TJ01]
acc|GENBANK|ABN04171.1|GENBANK|EF213569|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|ABN04177.1|GENBANK|EF213575|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AKJ66260.1|NEIGHBOR|KP343691|N protein [Infectious bronchitis virus]
acc|GENBANK|AHZ58508.1|NEIGHBOR|KJ813439|N protein [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|AVV64339.1|NEIGHBOR|MF083115|nucleocapsid protein [Porcine hemagglutinating encephalomyelitis virus]
acc|GENBANK|ASY98690.1|NEIGHBOR|MF095123|nucleocapsid protein [Porcine deltacoronavirus]
acc|GENBANK|AYN64565.1|NEIGHBOR|MH940245|nucleocapsid phosphoprotein [Human coronavirus HKU1]
acc|GENBANK|ATD12178.1|NEIGHBOR|MF882923|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|ART35292.1|GENBANK|KR265084|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|ANF07159.1|GENBANK|KR265205|nucleocapsid protein [Canine respiratory coronavirus]
acc|GENBANK|AJA91213.1|NEIGHBOR|KM349743|nucleocapsid protein [Betacoronavirus HKU24]
acc|GENBANK|CAD67607.1|GENBANK|AJ544718|nucleocapsid protein [Puffinosis coronavirus]
acc|GENBANK|ASL68949.1|GENBANK|KX442564|nucleocapsid protein [Hypsugo bat coronavirus HKU25]
acc|GENBANK|AAA46462.1|GENBANK|M80644|nucleocapsid protein [Murine hepatitis virus]
acc|GENBANK|AWH62999.1|GENBANK|MF737175|nucleocapsid protein [Bovine coronavirus]
acc|GENBANK|ABS87269.1|GENBANK|EF682498|nucleocapsid protein [Murine hepatitis virus]
acc|GENBANK|ABF61485.1|GENBANK|DQ490207|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|ABF61501.1|GENBANK|DQ490209|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|ABF61522.1|GENBANK|DQ490212|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|ABF61574.1|GENBANK|DQ490219|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|ARB66178.1|NEIGHBOR|KX364297|N protein [Infectious bronchitis virus]
acc|GENBANK|ADY17917.1|GENBANK|HQ166910|putative nucleoprotein [Zaria bat coronavirus]
acc|GENBANK|AIZ74407.1|GENBANK|KJ361499|N [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|AIZ74430.1|NEIGHBOR|KJ361501|N [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|BAM15655.1|GENBANK|AB671298|nucleocapsid protein [Equine coronavirus]
acc|GENBANK|AYR18603.1|GENBANK|MH687968|nucleocapsid protein [Betacoronavirus sp.]
acc|GENBANK|AYR18621.1|GENBANK|MH687970|nucleocapsid protein [Betacoronavirus sp.]
acc|GENBANK|ACT31368.1|GENBANK|GQ229248|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AAZ67043.1|GENBANK|DQ071613|nucleocapsid protein [Bat SARS coronavirus Rp1]
acc|GENBANK|AGG22549.1|NEIGHBOR|KC667074|N protein [Human betacoronavirus 2c England-Qatar/2012]
acc|GENBANK|AAB48156.1|GENBANK|U52595|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AAZ67039.1|NEIGHBOR|DQ412043|nucleocapsid protein [Bat SARS CoV Rm1/2004]
acc|GENBANK|ABN10855.1|NEIGHBOR|EF065506|nucleocapsid phosphoprotein [Bat coronavirus HKU4-2]
acc|GENBANK|ABN10891.1|NEIGHBOR|EF065510|nucleocapsid phosphoprotein [Bat coronavirus HKU5-2]
acc|GENBANK|ABN10923.1|NEIGHBOR|EF065514|nucleocapsid phosphoprotein [Bat coronavirus HKU9-2]
acc|GENBANK|ABN10931.1|NEIGHBOR|EF065515|nucleocapsid phosphoprotein [Bat coronavirus HKU9-3]
acc|GENBANK|ABN10939.1|NEIGHBOR|EF065516|nucleocapsid phosphoprotein [Bat coronavirus HKU9-4]
acc|GENBANK|BBC54826.1|GENBANK|LC364342|nucleoprotein [Falcon coronavirus UAE-HKU27]
acc|GENBANK|BBC54856.1|GENBANK|LC364345|nucleoprotein [Quail coronavirus UAE-HKU30]
acc|GENBANK|CEK09117.1|NEIGHBOR|LN610099|N [Guinea fowl coronavirus GfCoV/FR/2011]
acc|GENBANK|AAS01074.1|GENBANK|AH013657|nucleocapsid protein [SARS coronavirus CUHK-L2]
acc|GENBANK|AID66495.1|GENBANK|KM044032|nucleoprotein [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|AID66496.1|GENBANK|KM044033|nucleoprotein [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|AID66497.1|GENBANK|KM044034|nucleoprotein [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|ACJ12048.1|NEIGHBOR|FJ376620|nucleocapsid phosphoprotein [Bulbul coronavirus HKU11-796]
acc|GENBANK|AYE67230.1|GENBANK|MH170225|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AAF68926.1|NEIGHBOR|AF207902|nucleocapsid protein [Murine hepatitis virus strain ML-11]
acc|GENBANK|AHA50766.1|GENBANK|KF272909|nucleocapsid [Bovine coronavirus]
acc|GENBANK|AID16664.1|GENBANK|KF294372|nucleocapsid protein [Longquan Rl rat coronavirus]
acc|GENBANK|AAR15907.1|GENBANK|AY363965|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AAM55465.1|GENBANK|AY102933|nucleocapsid protein [Murine hepatitis virus]
acc|GENBANK|AKB91481.1|GENBANK|KM658209|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|ACP74158.1|GENBANK|FJ876818|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AIY51835.1|NEIGHBOR|KM213963|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|ADC42845.1|GENBANK|GU246592|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|APY23630.1|NEIGHBOR|KX252788|N protein [Infectious bronchitis virus]
acc|GENBANK|APF31790.1|GENBANK|KX266233|nucleocapsid protein [Bovine coronavirus]
acc|GENBANK|AHI48669.1|GENBANK|KJ156873|N protein [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|AHI48825.1|GENBANK|KJ156907|N protein [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|AIE47686.1|GENBANK|KJ690956|nucleocapsid protein [Goose coronavirus]
acc|GENBANK|AIE47687.1|GENBANK|KJ690957|nucleocapsid protein [Duck coronavirus]
acc|GENBANK|AIE47688.1|GENBANK|KJ690958|nucleocapsid protein [Duck coronavirus]
acc|GENBANK|AIE47689.1|GENBANK|KJ690959|nucleocapsid protein [Duck coronavirus]
acc|GENBANK|AIE47690.1|GENBANK|KJ690960|nucleocapsid protein [Bean goose coronavirus]
acc|GENBANK|AIE47691.1|GENBANK|KJ690961|nucleocapsid protein [Bean goose coronavirus]
acc|GENBANK|AIE47692.1|GENBANK|KJ690962|nucleocapsid protein [Mallard coronavirus]
acc|GENBANK|AIE47693.1|GENBANK|KJ690963|nucleocapsid protein [Mallard coronavirus]
acc|GENBANK|AIG13103.1|NEIGHBOR|KC869678|N protein [Coronavirus Neoromicia/PML-PHE1/RSA/2011]
acc|GENBANK|AGO06008.1|GENBANK|KC875821|nucleocapsid [Human betacoronavirus 2c EMC/2012]
acc|GENBANK|AAR25141.1|GENBANK|AY461522|nucleocapsid protein [Human coronavirus OC43]
acc|GENBANK|AFJ11183.1|GENBANK|JQ088078|N protein [Infectious bronchitis virus]
acc|GENBANK|ACL27887.1|GENBANK|FJ491756|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AGX27818.1|NEIGHBOR|KC545386|N [Betacoronavirus Erinaceus/VMC/DEU/2012]
acc|GENBANK|ABG47058.1|NEIGHBOR|DQ648794|nucleocapsid protein [Bat coronavirus (BtCoV/133/2005)]
acc|GENBANK|ABG76840.1|GENBANK|DQ679419|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|CAI40297.1|GENBANK|AJ871017|putative nucleocapsid protein [Goose coronavirus]
acc|GENBANK|CAI40300.1|GENBANK|AJ871018|putative nucleocapsid protein [Goose coronavirus]
acc|GENBANK|CAI40309.1|GENBANK|AJ871021|putative nucleocapsid protein [Goose coronavirus]
acc|GENBANK|CAI40312.1|GENBANK|AJ871022|putative nucleocapsid protein [Pigeon coronavirus]
acc|GENBANK|CAI40314.1|GENBANK|AJ871023|putative nucleocapsid protein [Pigeon coronavirus]
acc|GENBANK|AEL12185.1|GENBANK|HQ916668|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AAW47245.1|GENBANK|AY771998|nucleocapsid protein [Murine hepatitis virus]
acc|GENBANK|AAX19443.1|GENBANK|AY790355|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|AAX19445.1|GENBANK|AY790357|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|AUO16370.1|GENBANK|KY523471|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|BAI67743.1|GENBANK|AB543561|nucleocapsid phosphoprotein [Bat coronavirus Philippines/Diliman1525G2/2008]
acc|GENBANK|ALE59711.1|GENBANK|KT247647|nucleocapsid protein [Bovine coronavirus]
acc|GENBANK|AMQ23459.1|GENBANK|KT318083|nucleocapsid protein [Bovine coronavirus]
acc|GENBANK|AVV62544.1|NEIGHBOR|MG021452|N protein [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|AKF17732.1|NEIGHBOR|KM454473|nucleocapsid protein [Duck coronavirus]
acc|GENBANK|AUL77354.1|GENBANK|MG407592|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|ANJ04982.1|GENBANK|KX073970|nucleocapsid protein [Bovine coronavirus]
acc|GENBANK|ANJ04983.1|GENBANK|KX073971|nucleocapsid protein [Bovine coronavirus]
acc|REFSEQ|YP_009273009.1|REFSEQ|NC_030886|nucleocapsid protein [Rousettus bat coronavirus]
acc|REFSEQ|YP_009072446.1|REFSEQ|NC_025217|nucleocapsid protein [Bat Hp-betacoronavirus/Zhejiang2013]
acc|REFSEQ|YP_005352842.1|REFSEQ|NC_016991|nucleocapsid protein [White-eye coronavirus HKU16]
acc|REFSEQ|YP_005352867.1|REFSEQ|NC_016994|nucleocapsid protein [Night heron coronavirus HKU19]
acc|REFSEQ|YP_005352875.1|REFSEQ|NC_016995|nucleocapsid protein [Wigeon coronavirus HKU20]
acc|REFSEQ|YP_005352885.1|REFSEQ|NC_016996|nucleocapsid protein [Common moorhen coronavirus HKU21]
acc|REFSEQ|YP_005454249.1|REFSEQ|NC_017083|nucleocapsid protein [Rabbit coronavirus HKU14]
acc|REFSEQ|YP_005352858.1|REFSEQ|NC_016993|nucleocapsid protein [Magpie-robin coronavirus HKU18]
acc|REFSEQ|YP_002308501.1|REFSEQ|NC_011549|nucleocapsid phosphoprotein [Thrush coronavirus HKU12-600]
acc|REFSEQ|YP_002308510.1|REFSEQ|NC_011550|nucleocapsid phosphoprotein [Munia coronavirus HKU13-3514]
acc|REFSEQ|YP_003858591.1|REFSEQ|NC_014470|nucleocapsid [Bat coronavirus BM48-31/BGR/2008]
acc|REFSEQ|YP_001039975.1|REFSEQ|NC_009021|nucleocapsid phosphoprotein [Rousettus bat coronavirus HKU9]
acc|REFSEQ|YP_001876448.1|REFSEQ|NC_010646|nucleocapsid protein [Beluga whale coronavirus SW1]
acc|REFSEQ|YP_009361864.1|REFSEQ|NC_034440|nucleocapsid phosphoprotein [Bat coronavirus]
acc|GENBANK|ADX59470.1|GENBANK|HQ728482|nucleocapsid protein [Eidolon bat coronavirus/Kenya/KY24/2006]
acc|GENBANK|AHY61344.1|NEIGHBOR|KJ473821|nucleocapsid phosphoprotein [BtVs-BetaCoV/SC2013]
acc|GENBANK|AHC28314.1|GENBANK|KF826863|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC28324.1|GENBANK|KF826873|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AAS48575.1|GENBANK|AY541753|nucleocapsid protein [SARS coronavirus xw002]
acc|GENBANK|AAS48576.1|GENBANK|AY541754|nucleocapsid protein [SARS coronavirus cw049]
acc|GENBANK|AAS48577.1|GENBANK|AY541755|nucleocapsid protein [SARS coronavirus cw037]
acc|GENBANK|AIV41850.1|NEIGHBOR|KF923898|nucleocapsid protein [Human coronavirus OC43]
acc|GENBANK|AVN89287.1|GENBANK|MG923465|N protein [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|ADV71763.1|NEIGHBOR|GU393334|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AVP25396.1|GENBANK|MG762665|N protein [Rousettus bat coronavirus HKU9]
acc|GENBANK|AVP25401.1|GENBANK|MG762670|N protein [Rousettus bat coronavirus HKU9]
acc|GENBANK|AVP78038.1|NEIGHBOR|MG772933|nucleocapsid protein [Bat SARS-like coronavirus]
acc|GENBANK|AUM60021.1|NEIGHBOR|MG596802|nucleocapsid protein [Middle East respiratory syndrome-related coronavirus]
acc|GENBANK|AWV67043.1|NEIGHBOR|MG693168|capsid [Bat coronavirus]
acc|GENBANK|AWV67051.1|NEIGHBOR|MG693169|capsid [Bat coronavirus]
acc|GENBANK|ADM33586.1|NEIGHBOR|HM211101|nucleocapsid phosphoprotein [Bat coronavirus HKU9-10-2]
acc|GENBANK|ADN86120.1|GENBANK|HM366154|nucleocapsid protein [Porcine hemagglutinating encephalomyelitis virus]
acc|GENBANK|ADN86135.1|GENBANK|HM366169|nucleocapsid protein [Porcine hemagglutinating encephalomyelitis virus]
acc|GENBANK|AFE48831.1|NEIGHBOR|JN874562|nucleocapsid protein [Rabbit coronavirus HKU14]
acc|GENBANK|AHC98310.1|GENBANK|KC623570|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98311.1|GENBANK|KC623571|nucleocapsid protein [Duck coronavirus]
acc|GENBANK|AHC98312.1|GENBANK|KC623572|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98314.1|GENBANK|KC623574|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98315.1|GENBANK|KC623575|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98317.1|GENBANK|KC623577|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98319.1|GENBANK|KC623579|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98320.1|GENBANK|KC623580|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98321.1|GENBANK|KC623581|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98324.1|GENBANK|KC623584|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98326.1|GENBANK|KC623586|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98330.1|GENBANK|KC623591|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98331.1|GENBANK|KC623592|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98333.1|GENBANK|KC623594|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98334.1|GENBANK|KC623595|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98336.1|GENBANK|KC623597|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98343.1|GENBANK|KC623605|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98346.1|GENBANK|KC623608|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98347.1|GENBANK|KC623609|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98350.1|GENBANK|KC623612|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98364.1|GENBANK|KC623626|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98367.1|GENBANK|KC623629|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98368.1|GENBANK|KC623630|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98373.1|GENBANK|KC623635|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AHC98375.1|GENBANK|KC623637|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AAY27741.1|GENBANK|AY962467|nucleocapsid protein [Bat coronavirus ZS-2005]
acc|GENBANK|ATP66736.1|GENBANK|KY370044|nucleocapsid protein [Rodent coronavirus]
acc|GENBANK|ATP66747.1|GENBANK|KY370046|nucleocapsid protein [Rodent coronavirus]
acc|GENBANK|ATP66759.1|GENBANK|KY370048|nucleocapsid protein [Rodent coronavirus]
acc|GENBANK|ATP66765.1|GENBANK|KY370049|nucleocapsid protein [Rodent coronavirus]
acc|GENBANK|ATP66782.1|GENBANK|KY370052|nucleocapsid protein [Rodent coronavirus]
acc|GENBANK|ASH89408.1|GENBANK|KY418019|nucleocapsid protein [Porcine hemagglutinating encephalomyelitis virus]
acc|GENBANK|AFQ00050.1|GENBANK|JX143761|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|CBJ23821.1|GENBANK|FN665664|nucleocapsid protein [Turkey coronavirus]
acc|GENBANK|ACA43018.1|GENBANK|EU442578|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|ACA43020.1|GENBANK|EU442580|nucleocapsid [Infectious bronchitis virus]
acc|GENBANK|AHC98392.1|GENBANK|KC786235|nucleocapsid protein [Infectious bronchitis virus]
acc|GENBANK|AJQ24067.1|GENBANK|KP113656|nucleocapsid phosphoprotein [Human coronavirus OC43]
acc|GENBANK|AJQ24068.1|GENBANK|KP113657|nucleocapsid phosphoprotein [Human coronavirus OC43]
acc|GENBANK|AJQ24069.1|GENBANK|KP113658|nucleocapsid phosphoprotein [Human coronavirus HKU1]
acc|GENBANK|AJQ24075.1|GENBANK|KP128900|nucleocapsid phosphoprotein [Human coronavirus OC43]
