LENGTH	1947
LCA	Viruses::ssRNA viruses::ssRNA positive-strand viruses, no DNA stage::Tymovirales::Betaflexiviridae
NBSEQ	146
KEYWORDS:
virus	138
RNA	83
replicase	76
polymerase	45
dependent	38
polyprotein	29
latent	26
associated	23
mottle	22
Potato	19
Cherry	17
Grapevine	15
stem	15
pitting	15
Apple	10
Asian	8
prunus	8
Chrysanthemum	7
rusty	7
rupestris	6
mild	6
replication	6
Cowpea	6
carlavirus	6
leaf	5
mosaic	5
Elderberry	5
green	5
twisted	5
Apricot	4
ring	4
common	4
RdRP	4
Garlic	4
chlorotic	3
RdRp	3
potato	3
Sweet	3
Shallot	3
Ligustrum	3
putative	2
directed	2
necrosis	2
necrotic	2
vein	2
ringspot	2
Blueberry	2
symptomless	2
Kalanchoe	2
Hop	2
Daphne	2
Lily	2
Phlox	2
Passiflora	2
scorch	2
Nerine	2
protein	1
Peach	1
viral	1
yellow	1
American	1
African	1
Red	1
fleck	1
yellowing	1
Alfalfa	1
Pepper	1
streak	1
crinkle	1
Melon	1
Elm	1
Sugarcane	1
striate	1
ATCC	1
hop	1
Carlavirus	1
HSO	1
2016a	1
Helleborus	1
net	1
Hydrangea	1
Narcissus	1
Jasmine	1
Poplar	1
PV257	1
Gaillardia	1
Yam	1
Butterbur	1
Hippeastrum	1
Aconitum	1
Mirabilis	1
jalapa	1
Atractylodes	1
clover	1
Coleus	1
Rubus	1
canadensis	1
Panax	1
ginseng	1
flexivirus	1
Polymerase	1
Pea	1
oil	1
palm	1
223K	1
SEQUENCES:
acc|GENBANK|AGI62184.1|NEIGHBOR|KC218927|replicase [Cherry rusty mottle associated virus]
acc|GENBANK|AGI62197.2|NEIGHBOR|KC218931|replicase [Cherry green ring mottle virus]
acc|GENBANK|CCQ25606.1|NEIGHBOR|HF571059|RNA dependent RNA polymerase [Potato virus S]
acc|GENBANK|CDK36471.1|NEIGHBOR|HG793797|polyprotein [Hop latent virus]
acc|GENBANK|ATG34128.1|GENBANK|MF133527|RNA-dependent RNA polymerase [Potato virus M]
acc|GENBANK|ATG34134.1|GENBANK|MF133528|RNA-dependent RNA polymerase [Potato virus M]
acc|GENBANK|AWD84271.1|NEIGHBOR|MF979534|replicase [Grapevine rupestris stem pitting-associated virus]
acc|GENBANK|AKU19344.1|NEIGHBOR|KR108251|RNA-dependent RNA polymerase [Red clover vein mosaic virus]
acc|GENBANK|AMR70494.1|NEIGHBOR|KR152654|RdRp [Potato virus S]
acc|GENBANK|ALJ56053.1|NEIGHBOR|KR185345|putative viral replicase [American hop latent virus]
acc|GENBANK|CAD24858.1|NEIGHBOR|AJ437481|RNA polymerase [Potato virus M]
acc|GENBANK|CAD92112.1|NEIGHBOR|AJ564638|polymerase [Lily symptomless virus]
acc|GENBANK|ASJ27555.1|NEIGHBOR|KY310580|replicase [Asian prunus virus 1]
acc|GENBANK|ASJ27560.1|NEIGHBOR|KY310581|replicase [Asian prunus virus 2]
acc|GENBANK|ASJ27570.1|NEIGHBOR|KY310583|replicase [Cherry necrotic rusty mottle virus]
acc|GENBANK|ASK12077.1|NEIGHBOR|MF033144|replicase [Potato virus S]
acc|GENBANK|BAU20378.1|NEIGHBOR|AB889483|replicase [Daphne virus S]
acc|GENBANK|ADQ43733.1|NEIGHBOR|HM854296|223K polyprotein [Potato virus M]
acc|GENBANK|APA22553.1|NEIGHBOR|KX925555|replicase [Grapevine rupestris stem pitting-associated virus]
acc|GENBANK|CBX24840.1|NEIGHBOR|FR694186|replicase [Apple stem pitting virus]
acc|GENBANK|AVI26732.1|NEIGHBOR|KY798310|RNA-dependent RNA polymerase [Apple stem pitting virus]
acc|GENBANK|AEP02955.1|NEIGHBOR|JF946772|RNA-dependent RNA polymerase [Apple stem pitting virus]
acc|GENBANK|AOT80763.1|NEIGHBOR|KX389311|replicase [Cherry rusty mottle associated virus]
acc|GENBANK|ANH10854.1|GENBANK|KU854930|RdRp polymerase [Carlavirus HSO-2016a]
acc|GENBANK|AOY34821.1|NEIGHBOR|KU923763|RdRp [Pepper virus A]
acc|GENBANK|ALP45946.1|NEIGHBOR|KR820548|RNA-dependent RNA polymerase [Cherry green ring mottle virus]
acc|GENBANK|CAK54342.1|GENBANK|AM282555|polyprotein [Chrysanthemum virus B]
acc|GENBANK|CAK54343.1|GENBANK|AM282556|polyprotein [Chrysanthemum virus B]
acc|GENBANK|CAK97712.1|GENBANK|AM285298|polyprotein [Chrysanthemum virus B]
acc|GENBANK|AFJ22628.1|GENBANK|JQ647830|replicase [Potato virus S]
acc|GENBANK|BAL03071.1|NEIGHBOR|AB623047|replicase [Helleborus net necrosis virus]
acc|GENBANK|ALV82119.1|NEIGHBOR|KT835289|replicase [Apple green crinkle associated virus]
acc|GENBANK|AYQ96083.1|GENBANK|MH638265|replicase [Grapevine virus T]
acc|GENBANK|AYQ96093.1|GENBANK|MH674168|replicase [Grapevine virus T]
acc|GENBANK|AYQ96113.1|GENBANK|MH674172|replicase [Grapevine virus T]
acc|GENBANK|AYQ96118.1|GENBANK|MH674173|replicase [Grapevine virus T]
acc|GENBANK|AYQ96123.1|GENBANK|MH674174|replicase [Grapevine virus T]
acc|GENBANK|AYQ96163.1|GENBANK|MH674182|replicase [Grapevine virus T]
acc|GENBANK|AYQ96168.1|GENBANK|MH674183|replicase [Grapevine virus T]
acc|GENBANK|AYQ96188.1|GENBANK|MH674187|replicase [Grapevine virus T]
acc|GENBANK|AYV96574.1|GENBANK|MH706739|RNA-dependent RNA polymerase [Potato virus H]
acc|GENBANK|ALT57209.1|GENBANK|KT893297|replicase [Asian prunus virus 2]
acc|GENBANK|ALT57214.1|GENBANK|KT893298|replicase [Asian prunus virus 3]
acc|GENBANK|ALT57219.1|GENBANK|KT893299|replicase [Asian prunus virus 3]
acc|GENBANK|BAF95196.1|NEIGHBOR|AB245142|replicase [Chrysanthemum virus B]
acc|GENBANK|ALB35654.1|NEIGHBOR|KR054734|replication-associated polyprotein [Grapevine rupestris stem pitting-associated virus]
acc|GENBANK|ALB35659.1|NEIGHBOR|KR054735|replication-associated polyprotein [Grapevine rupestris stem pitting-associated virus]
acc|GENBANK|ALF99743.1|NEIGHBOR|KR072674|RNA-dependent RNA polymerase [Sweet potato yellow mottle virus]
acc|GENBANK|BAZ96203.1|NEIGHBOR|LC279526|RNA-dependent RNA-polymerase [Shallot latent virus]
acc|GENBANK|BBD14449.1|GENBANK|LC373513|replicase [Cherry virus B]
acc|GENBANK|CDZ92711.1|NEIGHBOR|LM999967|RNA dependent RNA polymerase [Apple stem pitting virus]
acc|GENBANK|AGU09694.1|NEIGHBOR|KF319056|RNA-dependent RNA polymerase [Apple stem pitting virus]
acc|GENBANK|AID68943.1|NEIGHBOR|KF321967|RNA-dependent RNA polymerase [Apple stem pitting virus]
acc|GENBANK|ACL01040.1|NEIGHBOR|FJ531635|putative replicase polyprotein [Kalanchoe latent virus]
acc|GENBANK|AGC11979.1|NEIGHBOR|JX683388|RNA-dependent RNA polymerase [Potato virus S]
acc|GENBANK|APU54656.1|NEIGHBOR|KX255694|replicase [Garlic common latent virus]
acc|GENBANK|ANH22485.1|GENBANK|KX272967|polymerase [Jasmine virus C]
acc|GENBANK|AFV34742.1|GENBANK|JX513892|RNA-dependent RNA polymerase [Grapevine rupestris stem pitting-associated virus]
acc|GENBANK|AIQ77663.1|NEIGHBOR|KJ020285|replicase [Garlic common latent virus]
acc|GENBANK|CAH55773.1|NEIGHBOR|X65102|replicase [Poplar mosaic virus (ATCC PV257)]
acc|GENBANK|AKN20442.1|NEIGHBOR|KP258176|replicase [Cherry rusty mottle associated virus]
acc|GENBANK|AKN20449.1|NEIGHBOR|KP258177|replicase [Cherry twisted leaf associated virus]
acc|GENBANK|AYC63228.1|NEIGHBOR|MG865890|replication protein [Ligustrum virus A]
acc|GENBANK|CAI06108.1|NEIGHBOR|AJ863510|RNA-directed RNA polymerase [Potato virus S]
acc|GENBANK|AWO72977.1|NEIGHBOR|MH264534|RNA-dependent RNA polymerase [Sweet potato chlorotic fleck virus]
acc|GENBANK|ARQ84116.1|NEIGHBOR|KY490039|RNA-dependent RNA polymerase [Apple stem pitting virus]
acc|GENBANK|AEC12424.1|NEIGHBOR|HQ258896|replicase [Shallot latent virus]
acc|GENBANK|ADT91605.1|NEIGHBOR|HQ339957|RNA-dependent RNA polymerase [Apricot latent virus]
acc|GENBANK|ADT91610.1|NEIGHBOR|HQ339958|RNA-dependent RNA polymerase [Apricot latent virus]
acc|GENBANK|ADT91615.1|NEIGHBOR|HQ339959|RNA-dependent RNA polymerase [Apricot latent virus]
acc|GENBANK|ANI85498.1|NEIGHBOR|KR998048|replicase [Asian prunus virus 2]
acc|GENBANK|ANI85508.1|NEIGHBOR|KR998050|replicase [Asian prunus virus 3]
acc|GENBANK|AHA59461.2|GENBANK|KF030846|replicase [Cherry twisted leaf associated virus]
acc|GENBANK|AHA59466.2|GENBANK|KF030849|replicase [Cherry rusty mottle associated virus]
acc|GENBANK|AHA59486.2|GENBANK|KF030859|replicase [Cherry twisted leaf associated virus]
acc|GENBANK|AHA59506.2|GENBANK|KF030869|replicase [Cherry rusty mottle associated virus]
acc|GENBANK|AHA59508.2|GENBANK|KF030870|replicase [Cherry rusty mottle associated virus]
acc|GENBANK|AHJ80307.1|GENBANK|KF030873|replicase [Cherry twisted leaf associated virus]
acc|GENBANK|AHJ80314.1|GENBANK|KF030878|replicase [Cherry twisted leaf associated virus]
acc|GENBANK|BAT32749.1|NEIGHBOR|LC004126|RNA-dependent RNA polymerase [Lily symptomless virus]
acc|GENBANK|AXP79052.1|NEIGHBOR|MF990287|RNA-dependent RNA polymerase [Potato latent virus]
acc|GENBANK|AWF83601.1|GENBANK|MG001925|replicase [Grapevine virus T]
acc|GENBANK|AUW53002.1|NEIGHBOR|MG012804|replicase [Nerine latent virus]
acc|GENBANK|AVN98095.1|GENBANK|MG432107|replicase [Chrysanthemum virus R]
acc|GENBANK|AXU37742.1|NEIGHBOR|MF496659|RNA-dependent RNA polymerase [Potato virus S]
acc|REFSEQ|YP_009158846.1|REFSEQ|NC_027527|replicase [Pea streak virus]
acc|REFSEQ|YP_009174681.1|REFSEQ|NC_028111|replicase [Nerine latent virus]
acc|REFSEQ|YP_009204561.1|REFSEQ|NC_028868|replicase [Asian prunus virus 2]
acc|REFSEQ|YP_009224952.1|REFSEQ|NC_029089|replicase polyprotein [Elderberry carlavirus E]
acc|REFSEQ|YP_009224946.1|REFSEQ|NC_029088|replicase polyprotein [Elderberry carlavirus D]
acc|REFSEQ|YP_009224940.1|REFSEQ|NC_029087|replicase polyprotein [Elderberry carlavirus C]
acc|REFSEQ|YP_009224934.1|REFSEQ|NC_029086|replicase polyprotein [Elderberry carlavirus B]
acc|REFSEQ|YP_009224928.1|REFSEQ|NC_029085|replicase polyprotein [Elderberry carlavirus A]
acc|REFSEQ|YP_006589919.1|REFSEQ|NC_018448|replicase [Sweet potato C6 virus]
acc|REFSEQ|YP_009288956.1|REFSEQ|NC_031089|replicase [Ligustrum virus A]
acc|REFSEQ|YP_006905861.1|REFSEQ|NC_019025|replication-associated polyprotein [Rubus canadensis virus 1]
acc|REFSEQ|YP_009022064.1|REFSEQ|NC_023892|replicase [Gaillardia latent virus]
acc|REFSEQ|YP_009134730.1|REFSEQ|NC_026248|replicase polyprotein [Yam latent virus]
acc|REFSEQ|YP_009126731.1|REFSEQ|NC_026616|RNA-dependent RNA polymerase [Alfalfa latent virus]
acc|REFSEQ|YP_002985636.1|REFSEQ|NC_012869|replicase polyprotein [Hydrangea chlorotic mottle virus]
acc|REFSEQ|YP_595727.1|REFSEQ|NC_008020|replicase [Daphne virus S]
acc|REFSEQ|YP_003324581.1|REFSEQ|NC_013527|replicase [Butterbur mosaic virus]
acc|REFSEQ|YP_004035878.1|REFSEQ|NC_014730|RNA-dependent RNA polymerase [Cowpea mild mottle virus]
acc|REFSEQ|YP_001497153.1|REFSEQ|NC_009892|replicase [Peach chlorotic mottle virus]
acc|REFSEQ|YP_717533.1|REFSEQ|NC_008292|polyprotein [Passiflora latent virus]
acc|REFSEQ|NP_047278.1|REFSEQ|NC_001946|RNA-dependent RNA polymerase [Cherry green ring mottle virus]
acc|REFSEQ|YP_001798592.1|REFSEQ|NC_010538|replicase polyprotein [Hop mosaic virus]
acc|REFSEQ|YP_001661446.1|REFSEQ|NC_010305|replicase [Ligustrum necrotic ringspot virus]
acc|REFSEQ|NP_612579.1|REFSEQ|NC_003499|polyprotein [Blueberry scorch virus]
acc|REFSEQ|NP_624313.1|REFSEQ|NC_003870|RNA polymerase [Sugarcane striate mosaic-associated virus]
acc|REFSEQ|YP_002308447.1|REFSEQ|NC_011540|RNA-dependent RNA polymerase [Hippeastrum latent virus]
acc|REFSEQ|YP_001552317.1|REFSEQ|NC_009991|replicase [Phlox virus B]
acc|REFSEQ|YP_277428.1|REFSEQ|NC_007289|RNA-directed RNA polymerase [Potato virus S]
acc|REFSEQ|YP_002776347.1|REFSEQ|NC_012519|RNA-dependent RNA polymerase [African oil palm ringspot virus]
acc|REFSEQ|YP_003075957.1|REFSEQ|NC_013006|RNA dependent RNA polymerase [Kalanchoe latent virus]
acc|REFSEQ|YP_001430021.1|REFSEQ|NC_009764|replicase [Coleus vein necrosis virus]
acc|REFSEQ|NP_116487.1|REFSEQ|NC_002795|polyprotein [Aconitum latent virus]
acc|REFSEQ|YP_001429585.1|REFSEQ|NC_009759|replication polyprotein [Potato virus P]
acc|REFSEQ|YP_699983.1|REFSEQ|NC_008266|RNA-dependent RNA polymerase [Narcissus common latent virus]
acc|REFSEQ|YP_004901680.1|REFSEQ|NC_016080|RNA dependent RNA Polymerase [Mirabilis jalapa mottle virus]
acc|REFSEQ|YP_004936159.1|REFSEQ|NC_016440|replicase [Garlic common latent virus]
acc|REFSEQ|YP_001086452.2|REFSEQ|NC_009087|polyprotein [Chrysanthemum virus B]
acc|REFSEQ|YP_004089619.1|REFSEQ|NC_014821|RNA-dependent RNA polymerase [Apricot latent virus]
acc|REFSEQ|NP_056767.1|REFSEQ|NC_001361|polyprotein [Potato virus M]
acc|REFSEQ|YP_001165301.1|REFSEQ|NC_009383|replicase [Phlox virus S]
acc|REFSEQ|YP_009505626.1|REFSEQ|NC_038324|RNA-dependent RNA polymerase [Melon yellowing-associated virus]
acc|REFSEQ|YP_009508317.1|REFSEQ|NC_038966|replicase [Atractylodes mottle virus]
acc|GENBANK|AXL97637.1|NEIGHBOR|MH379107|RNA dependent RNA polymerase [Potato virus H]
acc|GENBANK|AXL95764.1|NEIGHBOR|MH379331|polyprotein [Passiflora latent virus]
acc|GENBANK|AXN92352.1|GENBANK|MH036372|replicase polyprotein [Panax ginseng flexivirus 1]
acc|GENBANK|BAB15950.1|NEIGHBOR|AB045371|RNA polymerase [Apple stem pitting virus]
acc|GENBANK|CRK77079.1|NEIGHBOR|LN851194|RNA-dependent RNA polymerase [Potato virus S]
acc|GENBANK|SNQ27846.1|GENBANK|LT898349|replicase polyprotein [Elm carlavirus]
acc|GENBANK|AXL94709.1|NEIGHBOR|MG938305|replicase [Grapevine rupestris stem pitting-associated virus]
acc|GENBANK|AXU24223.1|NEIGHBOR|MG657357|replicase [Shallot latent virus]
acc|GENBANK|ATB18077.1|NEIGHBOR|KY178275|RNA-dependent RNA polymerase [Cherry green ring mottle virus]
acc|GENBANK|AAY18409.1|NEIGHBOR|AY941199|replicase polyprotein [Blueberry scorch virus]
acc|GENBANK|ABV56203.1|NEIGHBOR|EU095327|RNA-dependent RNA polymerase [Apple stem pitting virus]
acc|GENBANK|ATV94962.1|NEIGHBOR|KY420906|replication polyprotein [Cowpea mild mottle virus]
acc|GENBANK|CAO78688.1|NEIGHBOR|AM765838|polyprotein [Chrysanthemum virus B]
acc|GENBANK|AGS13082.1|NEIGHBOR|KC884244|RdRP [Cowpea mild mottle virus]
acc|GENBANK|AGS13088.1|NEIGHBOR|KC884245|RdRP [Cowpea mild mottle virus]
acc|GENBANK|AGS13094.1|NEIGHBOR|KC884246|RdRP [Cowpea mild mottle virus]
acc|GENBANK|AGS13100.1|NEIGHBOR|KC884247|RdRP [Cowpea mild mottle virus]
acc|GENBANK|CAA92815.1|NEIGHBOR|Z68502|replicase [Garlic latent virus]
acc|GENBANK|AWT04713.1|NEIGHBOR|MF503894|RNA-dependent RNA polymerase [Potato virus S]
