LENGTH	1838
LCA	Viruses::Riboviria::Pararnavirae::Artverviricota::Revtraviricetes::Ortervirales::Retroviridae::Orthoretrovirinae
NBSEQ	71
KEYWORDS:
domain	246
integrase	171
reverse	137
transcriptase	137
dna	119
binding	110
zinc	78
core	71
polymerase	70
dependent	70
rna	70
thumb	67
rnase	66
protein	30
gag	28
retroviral	21
aspartyl	11
protease	11
dutpase	11
gene	10
nucleocapsid	10
p24	10
polyprotein	9
viral	9
finger	9
p10	9
knuckle	8
patch	8
envelope	2
glycoprotein	1
retro	1
transcribing	1
viruses	1
KEYWORDS FROM SEQUENCES:
pol	47
protein	26
retrovirus	25
virus	24
polymerase	17
avian	14
homo	12
sapiens	12
pro	12
gag	11
polyprotein	10
leukosis	9
endogenous	9
simian	8
sheep	6
jaagsiekte	6
human	5
precursor	5
tumor	4
reverse	4
transcriptase	4
ovis	4
aries	4
mammary	4
mouse	3
musculus	3
disease	3
lymphoproliferative	3
myeloblastosis	3
putative	2
monkey	2
integrase	2
type	2
associated	2
mus	2
prairie	2
dog	2
enzootic	2
nasal	2
tumour	2
pr160	2
bovine	1
viral	1
squirrel	1
dna	1
and	1
truncated	1
chlorocebus	1
desmodus	1
rotundus	1
black	1
rsa	1
ch15	1
fusion	1
goats	1
mason	1
pfizer	1
leukemia	1
retroviridae	1
trichosurus	1
vulpecula	1
oryctolagus	1
cuniculus	1
env	1
sabaeus	1
eav	1
syrian	1
hamster	1
gunnison	1
rous	1
sarcoma	1
SEQUENCES:
acc|REFSEQ|YP_009243641.1|REFSEQ|NC_029852|putative viral DNA polymerase [Bovine retrovirus CH15]
acc|REFSEQ|YP_009305201.1|REFSEQ|NC_031326|pol protein [Simian retrovirus 8]
acc|REFSEQ|NP_040550.1|REFSEQ|NC_001408|polymerase [Avian leukosis virus - RSA]
acc|REFSEQ|YP_003864102.1|REFSEQ|NC_014474|pol protein [Simian retrovirus 4]
acc|REFSEQ|NP_862833.2|REFSEQ|NC_004994|gag-pro-pol fusion [Enzootic nasal tumour virus of goats]
acc|REFSEQ|NP_056880.1|REFSEQ|NC_001503|Pr160 [Mouse mammary tumor virus]
acc|REFSEQ|NP_056891.1|REFSEQ|NC_001550|RT-IN [Mason-Pfizer monkey virus]
acc|REFSEQ|NP_041186.1|REFSEQ|NC_001494|pol protein [Jaagsiekte sheep retrovirus]
acc|REFSEQ|YP_004222728.1|REFSEQ|NC_015116|pol polyprotein [Avian leukemia virus]
acc|REFSEQ|NP_041261.1|REFSEQ|NC_001514|pol protein [Squirrel monkey retrovirus]
acc|GENBANK|QLI47668.1|GENBANK|MT138119|pol polyprotein [Retroviridae sp.]
acc|GENBANK|AAF29458.1|GENBANK|AF153615|Pol [Ovis aries]
acc|GENBANK|AAF36395.1|GENBANK|AF224725|pol polyprotein [Trichosurus vulpecula]
acc|GENBANK|AAM81191.1|GENBANK|AF480925|pol protein [Oryctolagus cuniculus]
acc|GENBANK|ABV71069.1|GENBANK|EF680297|Pol protein [Ovis aries]
acc|GENBANK|ABV71109.1|GENBANK|EF680308|Pol protein [Ovis aries]
acc|GENBANK|ABV71118.1|GENBANK|EF680312|Pro-Pol [Ovis aries]
acc|GENBANK|AAF88167.1|GENBANK|AF074086|polymerase [Homo sapiens]
acc|GENBANK|AAC63290.1|GENBANK|AF080229|polymerase [Homo sapiens]
acc|GENBANK|AAC63291.1|GENBANK|AF080231|polymerase [Homo sapiens]
acc|GENBANK|AAC63292.1|GENBANK|AF080232|polymerase [Homo sapiens]
acc|GENBANK|AAD51791.1|GENBANK|AF164609|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAD51793.1|GENBANK|AF164611|Gag-Pro-Pol-Env protein [Homo sapiens]
acc|GENBANK|AAD51796.1|GENBANK|AF164613|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAD51797.1|GENBANK|AF164614|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAD51799.1|GENBANK|AF164615|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAL60056.1|GENBANK|AF333072|pol protein [Homo sapiens]
acc|GENBANK|BAP46324.1|GENBANK|AB935214|pol protein [Chlorocebus sabaeus]
acc|GENBANK|AAO27434.1|GENBANK|AY186778|polymerase [Homo sapiens]
acc|GENBANK|ABG91576.1|GENBANK|DQ821442|reverse transcriptase [Homo sapiens]
acc|GENBANK|ABD97982.1|GENBANK|DQ436346|putative gag-pol protein [Mus musculus]
acc|GENBANK|QNN81291.1|GENBANK|MT559331|pol [Mus musculus musculus]
acc|GENBANK|BAG16457.1|NEIGHBOR|AB303223|polymerase [Avian leukosis virus]
acc|GENBANK|BAM71050.1|GENBANK|AB611707|pol protein [Simian retrovirus Y]
acc|GENBANK|BAK64240.1|GENBANK|AB617817|polymerase [Avian leukosis virus]
acc|GENBANK|BAL70321.1|NEIGHBOR|AB669433|polymerase [Avian leukosis virus]
acc|GENBANK|AAD45226.1|NEIGHBOR|AF105220|pol [Jaagsiekte sheep retrovirus]
acc|GENBANK|AAD43256.1|NEIGHBOR|AF126467|polymerase [Simian retrovirus 2]
acc|GENBANK|AAG18012.1|GENBANK|AF248269|gag-pro-pol precursor protein [Human mammary tumor virus]
acc|GENBANK|ADO34843.1|NEIGHBOR|HM452339|polymerase polyprotein [Avian leukosis virus]
acc|GENBANK|ADO34852.1|NEIGHBOR|HM452342|polymerase polyprotein [Avian leukosis virus]
acc|GENBANK|AFV99544.1|GENBANK|JX848322|pol protein [Avian leukosis virus]
acc|GENBANK|AGV75852.1|GENBANK|KC802224|pol precursor polyprotein [Lymphoproliferative disease virus]
acc|GENBANK|AJR27940.1|GENBANK|KP175583|truncated pol [Desmodus rotundus endogenous retrovirus]
acc|GENBANK|AJG42161.1|NEIGHBOR|KP284572|Pol [Avian leukosis virus ev/J]
acc|GENBANK|AAK38686.1|NEIGHBOR|AF357971|polymerase [Jaagsiekte sheep retrovirus]
acc|GENBANK|CAC28509.2|NEIGHBOR|AJ292966|reverse transcriptase/integrase [Avian endogenous retrovirus EAV-HP]
acc|GENBANK|AKE78833.1|NEIGHBOR|KP691837|pol protein [Jaagsiekte sheep retrovirus]
acc|GENBANK|AAA46304.1|GENBANK|L10922|pol [Avian myeloblastosis-associated virus type 1]
acc|GENBANK|AAA46307.1|GENBANK|L10924|pol [Avian myeloblastosis-associated virus type 2]
acc|GENBANK|BBG56792.1|GENBANK|LC426347|pol protein [Simian retrovirus 5]
acc|GENBANK|AAA47732.1|NEIGHBOR|M11841|pol protein [Simian retrovirus 1]
acc|GENBANK|AAA46542.1|NEIGHBOR|M15122|Pr160 gag pro pol precursor [Mouse mammary tumor virus]
acc|GENBANK|AAA46253.1|GENBANK|M65014|pol protein [Jaagsiekte sheep retrovirus]
acc|GENBANK|QCY65254.1|GENBANK|MK164396|pol protein [Enzootic nasal tumour virus 2]
acc|GENBANK|QDK64674.1|GENBANK|MK304634|pro-pol [Black Syrian hamster retrovirus]
acc|GENBANK|QIB89443.1|NEIGHBOR|MN161849|gag-pro-pol polyprotein [Jaagsiekte sheep retrovirus]
acc|GENBANK|QKU38051.1|GENBANK|MT361316|Pol [Gunnison's prairie dog retrovirus]
acc|GENBANK|QKU38055.1|GENBANK|MT361317|Pol [Endogenous prairie dog retrovirus]
acc|GENBANK|AAB31929.1|GENBANK|S74099|polyprotein II [Avian myeloblastosis virus]
acc|GENBANK|AAA62195.1|GENBANK|U09568|Pol precursor [Lymphoproliferative disease virus]
acc|GENBANK|AAB07711.1|GENBANK|U47118|polymerase [Human endogenous retrovirus]
acc|GENBANK|AAC97565.1|NEIGHBOR|U85505|polymerase [Simian endogenous retrovirus]
acc|GENBANK|AAC97567.1|GENBANK|U85506|polymerase [Simian endogenous retrovirus]
acc|GENBANK|CAA45618.1|GENBANK|X64337|Reverse Transcriptase-and Integrase precursor [Lymphoproliferative disease virus]
acc|GENBANK|CAA71417.1|GENBANK|Y10391|pol protein [Human endogenous retrovirus K]
acc|GENBANK|CAA76879.1|GENBANK|Y17832|pol protein [Human endogenous retrovirus K]
acc|GENBANK|CAA76882.1|GENBANK|Y17833|pol protein [Human endogenous retrovirus K]
acc|GENBANK|BAA03767.1|NEIGHBOR|D16249|gag pro pol polyprotein [Mouse mammary tumor virus]
acc|GENBANK|ABO60875.1|NEIGHBOR|EF467236|pol polyprotein [Avian leukosis virus]
acc|GENBANK|ACL14945.1|GENBANK|FJ041197|reverse transcriptase [Rous sarcoma virus]
