LENGTH	389
LCA	Viruses::Riboviria::Orthornavirae::Pisuviricota::Pisoniviricetes::Nidovirales::Cornidovirineae::Coronaviridae
NBSEQ	115
KEYWORDS:
coronavirus	115
nucleocapsid	115
KEYWORDS FROM SEQUENCES:
nucleocapsid	98
protein	90
coronavirus	77
bat	38
alphacoronavirus	19
229e	16
feline	15
virus	14
human	14
porcine	13
epidemic	13
diarrhea	13
related	10
2006	6
alphacov	5
nl63	5
kenya	5
nucleoprotein	5
ferret	4
canine	4
miniopterus	3
rhinolophus	3
kuhlii	3
hipposideros	3
camel	2
btrf	2
hub2013	2
wencheng	2
shrew	2
rousettus	2
hku10	2
hku2	2
scotophilus	2
512	2
cov	2
italy	2
rat	2
chaerephon	2
lucheng	2
phosphoprotein	2
glycoprotein	1
swine	1
enteric	1
yn2012	1
btnv	1
sc2013	1
btmr	1
sax2011	1
accov	1
jc34	1
mink	1
strain	1
wd1127	1
cdphe15	1
usa	1
infectious	1
peritonitis	1
hku8	1
2008	1
3398	1
2015	1
respiratory	1
rodent	1
tylonycteris	1
systemic	1
eptesicus	1
fuscus	1
appalachian	1
cardioderma	1
ky43	1
ky41	1
ky33	1
ky22	1
btmf	1
206645	1
2011	1
ukma1	1
hku33	1
hku32	1
pomona	1
chb25	1
2000	1
aegyptiacus	1
alpaca	1
uu40	1
ky27	1
4e98	1
3363	1
plmg1	1
affinis	1
hku7	1
ghanakwam	1
uu7	1
SEQUENCES:
acc|REFSEQ|YP_009256201.1|REFSEQ|NC_030292|nucleocapsid protein [Ferret coronavirus]
acc|REFSEQ|YP_009194643.1|REFSEQ|NC_028752|nucleocapsid protein [Camel alphacoronavirus]
acc|REFSEQ|YP_009199247.1|REFSEQ|NC_028806|nucleoprotein [Swine enteric coronavirus]
acc|REFSEQ|YP_009200739.1|REFSEQ|NC_028824|nucleocapsid protein [BtRf-AlphaCoV/YN2012]
acc|REFSEQ|YP_009199794.1|REFSEQ|NC_028814|nucleocapsid protein [BtRf-AlphaCoV/HuB2013]
acc|REFSEQ|YP_009201734.1|REFSEQ|NC_028833|nucleocapsid protein [BtNv-AlphaCoV/SC2013]
acc|REFSEQ|YP_009199613.1|REFSEQ|NC_028811|nucleocapsid protein [BtMr-AlphaCoV/SAX2011]
acc|REFSEQ|YP_009328939.1|REFSEQ|NC_032107|N protein [NL63-related bat coronavirus]
acc|REFSEQ|YP_009380526.1|REFSEQ|NC_034972|nucleocapsid protein [Coronavirus AcCoV-JC34]
acc|REFSEQ|YP_009389428.1|REFSEQ|NC_035191|nucleocapsid protein [Wencheng Sm shrew coronavirus]
acc|REFSEQ|YP_009019186.1|REFSEQ|NC_023760|nucleocapsid protein [Mink coronavirus strain WD1127]
acc|REFSEQ|YP_006908646.1|REFSEQ|NC_018871|nucleocapsid protein [Rousettus bat coronavirus HKU10]
acc|REFSEQ|YP_008439206.1|REFSEQ|NC_022103|nucleoprotein [Bat coronavirus CDPHE15/USA/2006]
acc|REFSEQ|NP_598314.1|REFSEQ|NC_003436|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|REFSEQ|YP_004070199.1|REFSEQ|NC_002306|nucleocapsid protein [Feline infectious peritonitis virus]
acc|REFSEQ|YP_001718609.1|REFSEQ|NC_010437|nucleocapsid protein [Bat coronavirus 1A]
acc|REFSEQ|NP_073556.1|REFSEQ|NC_002645|nucleocapsid protein [Human coronavirus 229E]
acc|REFSEQ|YP_003771.1|REFSEQ|NC_005831|nucleocapsid protein [Human coronavirus NL63]
acc|REFSEQ|YP_001718616.1|REFSEQ|NC_010438|nucleocapsid protein [Miniopterus bat coronavirus HKU8]
acc|REFSEQ|YP_001552240.1|REFSEQ|NC_009988|nucleocapsid phosphoprotein [Rhinolophus bat coronavirus HKU2]
acc|REFSEQ|YP_001351688.1|REFSEQ|NC_009657|nucleocapsid protein [Scotophilus bat coronavirus 512]
acc|REFSEQ|YP_009336487.1|REFSEQ|NC_032730|nucleocapsid protein [Lucheng Rn rat coronavirus]
acc|REFSEQ|YP_009755894.1|REFSEQ|NC_046964|nucleocapsid protein [Alphacoronavirus Bat-CoV/P.kuhlii/Italy/3398-19/2015]
acc|REFSEQ|YP_009824971.1|REFSEQ|NC_048216|N protein [NL63-related bat coronavirus]
acc|GENBANK|QHB49082.1|GENBANK|MN488618|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QHB49083.1|GENBANK|MN488619|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QHB49088.1|GENBANK|MN488624|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|BAC01161.1|GENBANK|AB086904|nucleocapsid [Feline coronavirus]
acc|GENBANK|BAN67915.1|GENBANK|AB781789|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ACS44223.1|NEIGHBOR|GQ152141|N [Feline coronavirus]
acc|GENBANK|ADC34642.1|GENBANK|GU017099|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ADC34645.1|GENBANK|GU017102|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ADC34656.1|GENBANK|GU017113|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ADD49353.1|GENBANK|GU338456|nucleocapsid [Ferret systemic coronavirus]
acc|GENBANK|ADO39823.1|NEIGHBOR|HQ392469|nucleocapsid protein [Feline coronavirus UU40]
acc|GENBANK|ADR79375.1|GENBANK|HQ585082|nucleocapsid [Alphacoronavirus Eptesicus fuscus/Appalachian]
acc|GENBANK|ADX59455.1|GENBANK|HQ728480|nucleocapsid protein [Cardioderma bat coronavirus/Kenya/KY43/2006]
acc|GENBANK|ADX59462.1|GENBANK|HQ728481|nucleocapsid protein [Chaerephon bat coronavirus/Kenya/KY41/2006]
acc|GENBANK|ADX59486.1|GENBANK|HQ728484|nucleocapsid protein [Miniopterus bat coronavirus/Kenya/KY27/2006]
acc|GENBANK|ADX59492.1|GENBANK|HQ728485|nucleocapsid protein [Miniopterus bat coronavirus/Kenya/KY33/2006]
acc|GENBANK|ADX59499.1|GENBANK|HQ728486|nucleocapsid protein [Chaerephon bat coronavirus/Kenya/KY22/2006]
acc|GENBANK|AEM44896.1|GENBANK|JF260915|nucleocapsid glycoprotein [Ferret coronavirus 4E98]
acc|GENBANK|AFI49435.1|NEIGHBOR|JQ410000|nucleocapsid protein [Alpaca respiratory coronavirus]
acc|GENBANK|AFJ54358.1|GENBANK|JQ723737|N protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AFU92074.1|NEIGHBOR|JQ989266|nucleocapsid protein [Hipposideros bat coronavirus HKU10]
acc|GENBANK|AGW80680.1|GENBANK|KF293662|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|AGT45943.1|GENBANK|KF435071|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AIE16045.1|GENBANK|KF840559|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AIE16046.1|GENBANK|KF840560|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AHJ11039.1|GENBANK|KF898123|nucleocapsid [Porcine epidemic diarrhea virus]
acc|GENBANK|AIA62224.1|NEIGHBOR|KJ473798|nucleocapsid protein [BtMf-AlphaCoV/HuB2013]
acc|GENBANK|AJD09530.1|GENBANK|KJ857407|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AKZ66475.1|NEIGHBOR|KP849472|nucleocapsid protein [Alphacoronavirus 1]
acc|GENBANK|ANF07130.1|GENBANK|KR265176|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|ANF07131.1|GENBANK|KR265177|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|ANF07140.1|GENBANK|KR265186|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|ALK28779.1|NEIGHBOR|KT253269|N [229E-related bat coronavirus]
acc|GENBANK|ALK28791.1|NEIGHBOR|KT253271|N [229E-related bat coronavirus]
acc|GENBANK|ALK28797.1|NEIGHBOR|KT253272|N [229E-related bat coronavirus]
acc|GENBANK|AMM42528.1|GENBANK|KT359769|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|ALA50169.1|NEIGHBOR|KT368903|nucleocapsid protein [Camel alphacoronavirus]
acc|GENBANK|ANA96052.1|GENBANK|KU182966|nucleocapsid protein [Bat coronavirus]
acc|GENBANK|AOV85638.1|GENBANK|KU836638|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|ANN12606.1|GENBANK|KX255651|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|ANN12607.1|GENBANK|KX268229|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|APD51503.1|NEIGHBOR|KY073747|N protein [229E-related bat coronavirus]
acc|GENBANK|APD51511.1|NEIGHBOR|KY073748|N protein [229E-related bat coronavirus]
acc|GENBANK|ATP66741.1|GENBANK|KY370045|nucleocapsid protein [Rodent coronavirus]
acc|GENBANK|AUG98080.1|GENBANK|KY566172|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AUG98084.1|GENBANK|KY566176|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AUG98106.1|GENBANK|KY566198|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ARI44792.1|GENBANK|KY770850|nucleocapsid protein [Bat coronavirus]
acc|GENBANK|ASF90489.1|NEIGHBOR|KY967733|nucleocapsid protein [Wencheng Sm shrew coronavirus]
acc|GENBANK|BAP75906.1|GENBANK|LC005736|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|BAS25714.1|GENBANK|LC029419|nucleocapsid protein [Ferret coronavirus]
acc|GENBANK|ASV51729.1|NEIGHBOR|MF577027|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AAQ17225.1|GENBANK|AY342160|nucleoprotein [Canine coronavirus]
acc|GENBANK|AAS68177.1|GENBANK|AY539715|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AAS98733.1|GENBANK|AY563107|nucleocapsid protein [Human coronavirus 3363/2000/NL]
acc|GENBANK|QBP43263.1|NEIGHBOR|MG916901|N protein [Bat coronavirus]
acc|GENBANK|QBP43274.1|NEIGHBOR|MG916902|N protein [Bat coronavirus]
acc|GENBANK|QBP43296.1|NEIGHBOR|MG916904|N protein [Bat coronavirus]
acc|GENBANK|QDE55569.1|GENBANK|MG923574|nucleocapsid protein [Bat alphacoronavirus]
acc|GENBANK|AYR18453.1|GENBANK|MH687942|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|AYR18509.1|GENBANK|MH687952|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QBF53922.1|GENBANK|MH744253|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QBF53929.1|GENBANK|MH744260|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QBF53930.1|GENBANK|MH744261|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AYF53099.1|GENBANK|MH817484|nucleoprotein [Feline alphacoronavirus 1]
acc|GENBANK|AZF86122.1|GENBANK|MH938448|nucleocapsid protein [Alphacoronavirus Bat-CoV/P.kuhlii/Italy/206645-41/2011]
acc|GENBANK|QBG64642.1|GENBANK|MK249068|nucleocapsid [Alphacoronavirus PLMg1]
acc|GENBANK|QBG64652.1|GENBANK|MK249069|nucleocapsid [Alphacoronavirus UKMa1]
acc|GENBANK|QGX41949.1|GENBANK|MK472067|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41961.1|GENBANK|MK472068|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41967.1|GENBANK|MK472069|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41955.1|GENBANK|MK472070|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41973.1|GENBANK|MK472071|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QCX35164.1|GENBANK|MK720944|nucleocapsid protein [Tylonycteris bat coronavirus HKU33]
acc|GENBANK|QCX35174.1|GENBANK|MK720945|nucleocapsid protein [Rhinolophus bat coronavirus HKU32]
acc|GENBANK|QED40655.1|NEIGHBOR|MK841494|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QDH43732.1|GENBANK|MN026166|nucleocapsid protein [Human coronavirus NL63]
acc|GENBANK|QER90708.1|GENBANK|MN065811|nucleocapsid protein [Bat alphacoronavirus]
acc|GENBANK|QEO75989.1|NEIGHBOR|MN369046|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QHA24669.1|GENBANK|MN611517|nucleocapsid protein [Rousettus aegyptiacus bat coronavirus 229E-related]
acc|GENBANK|QHA24700.1|GENBANK|MN611521|nucleocapsid protein [Scotophilus kuhlii bat coronavirus 512-related]
acc|GENBANK|QHA24707.1|GENBANK|MN611522|nucleocapsid protein [Rhinolophus affinis bat coronavirus HKU2-related]
acc|GENBANK|QHA24728.1|GENBANK|MN611525|nucleocapsid protein [Hipposideros pomona bat coronavirus CHB25]
acc|GENBANK|QLE11829.1|GENBANK|MT663548|nucleocapsid protein [Bat alphacoronavirus]
acc|GENBANK|QOE77292.1|NEIGHBOR|MT820627|nucleocapsid phosphoprotein [Lucheng Rn rat coronavirus]
acc|GENBANK|ABE73420.1|GENBANK|DQ462763|nucleocapsid protein [Human coronavirus NL63]
acc|GENBANK|ABG75577.1|GENBANK|DQ666342|nucleocapsid [Bat coronavirus 1B]
acc|GENBANK|ABG75578.1|GENBANK|DQ666343|nucleocapsid [Bat coronavirus HKU7]
acc|GENBANK|ACN78944.1|GENBANK|FJ710056|nucleoprotein [Bat coronavirus Hipposideros/GhanaKwam/19/2008]
acc|GENBANK|ACR10356.1|GENBANK|FJ917527|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ACT10882.1|NEIGHBOR|FJ938053|nucleocapsid protein [Feline coronavirus UU7]
