LENGTH	380
LCA	Viruses::Riboviria::Orthornavirae::Pisuviricota::Pisoniviricetes::Nidovirales::Cornidovirineae::Coronaviridae
NBSEQ	108
KEYWORDS:
coronavirus	108
nucleocapsid	108
protein	1
family	1
hopa1	1
effector	1
KEYWORDS FROM SEQUENCES:
nucleocapsid	90
protein	84
coronavirus	70
bat	35
alphacoronavirus	24
229e	15
virus	14
human	14
porcine	14
feline	13
diarrhea	13
epidemic	13
related	10
nucleoprotein	6
2006	5
hipposideros	5
kenya	5
miniopterus	4
nl63	4
camel	3
canine	3
shrew	3
kuhlii	3
ferret	3
wencheng	3
phosphoprotein	2
rat	2
2008	2
italy	2
rhinolophus	2
enteric	2
cov	2
hku10	2
lucheng	2
chaerephon	2
strain	1
mink	1
schreibersii	1
2011	1
camel229e	1
glycoprotein	1
rodent	1
2010	1
2000	1
eptesicus	1
myotis	1
tylonycteris	1
msu1	1
ghanaboo	1
344	1
ghanakwam	1
transmissible	1
gastroenteritis	1
ukrn3	1
206645	1
206679	1
wd1133	1
4e98	1
hku33	1
hku32	1
rousettus	1
aegyptiacus	1
pusillus	1
hku8	1
scotophilus	1
512	1
affinis	1
hku2	1
pomona	1
chb25	1
btms	1
alphacov	1
gs2013	1
3363	1
hku7	1
fuscus	1
appalachian	1
plmg1	1
ukma1	1
lucifugus	1
uu7	1
cardioderma	1
ky43	1
ky41	1
ky27	1
ky33	1
ky22	1
SEQUENCES:
acc|GENBANK|QHQ97048.1|NEIGHBOR|MN486588|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AJO26979.1|NEIGHBOR|KP143507|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ABB90482.1|GENBANK|DQ243939|nucleoprotein [Human coronavirus 229E]
acc|GENBANK|ABB90484.1|GENBANK|DQ243941|nucleoprotein [Human coronavirus 229E]
acc|GENBANK|ABC70094.1|GENBANK|DQ340562|nucleocapsid protein [Ferret enteric coronavirus MSU1]
acc|GENBANK|ACN78943.1|GENBANK|FJ710055|nucleoprotein [Bat coronavirus Hipposideros/GhanaBoo/344/2008]
acc|GENBANK|ACN78944.1|GENBANK|FJ710056|nucleoprotein [Bat coronavirus Hipposideros/GhanaKwam/19/2008]
acc|GENBANK|ACN71201.1|NEIGHBOR|FJ755618|nucleoprotein [Transmissible gastroenteritis virus]
acc|GENBANK|QAS69032.1|NEIGHBOR|MH539766|nucleocapsid protein [Porcine enteric alphacoronavirus]
acc|GENBANK|ACS44223.1|NEIGHBOR|GQ152141|N [Feline coronavirus]
acc|GENBANK|ADC34634.1|GENBANK|GU017091|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ADC34642.1|GENBANK|GU017099|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ADC34645.1|GENBANK|GU017102|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ADC34656.1|GENBANK|GU017113|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|QTE76076.1|NEIGHBOR|MW249018|nucleocapsid protein [Bat coronavirus]
acc|GENBANK|ANA96052.1|GENBANK|KU182966|nucleocapsid protein [Bat coronavirus]
acc|GENBANK|AOG74793.1|NEIGHBOR|KU291449|N [Camel alphacoronavirus Camel229E]
acc|GENBANK|AFJ54358.1|GENBANK|JQ723737|N protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AFD98754.1|NEIGHBOR|JQ765563|nucleocapsid protein [Human coronavirus NL63]
acc|GENBANK|AYP73643.1|NEIGHBOR|MG546689|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AYF53099.1|GENBANK|MH817484|nucleoprotein [Feline alphacoronavirus 1]
acc|GENBANK|QGX41949.1|GENBANK|MK472067|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41961.1|GENBANK|MK472068|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41967.1|GENBANK|MK472069|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41955.1|GENBANK|MK472070|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41973.1|GENBANK|MK472071|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|AHJ11039.1|GENBANK|KF898123|nucleocapsid [Porcine epidemic diarrhea virus]
acc|GENBANK|QBG64662.1|GENBANK|MK163627|nucleocapsid [Alphacoronavirus UKRn3]
acc|GENBANK|ABE73420.1|GENBANK|DQ462763|nucleocapsid protein [Human coronavirus NL63]
acc|GENBANK|APD51495.1|NEIGHBOR|KY073746|N protein [NL63-related bat coronavirus]
acc|GENBANK|APD51503.1|NEIGHBOR|KY073747|N protein [229E-related bat coronavirus]
acc|GENBANK|APD51511.1|NEIGHBOR|KY073748|N protein [229E-related bat coronavirus]
acc|GENBANK|QED40655.1|NEIGHBOR|MK841494|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AZF86122.1|GENBANK|MH938448|nucleocapsid protein [Alphacoronavirus Bat-CoV/P.kuhlii/Italy/206645-41/2011]
acc|GENBANK|AZF86134.1|GENBANK|MH938450|nucleocapsid protein [Alphacoronavirus Bat-CoV/P.kuhlii/Italy/206679-3/2010]
acc|GENBANK|ASF90463.1|NEIGHBOR|KY967723|nucleocapsid protein [Wencheng Sm shrew coronavirus]
acc|GENBANK|ASF90473.1|NEIGHBOR|KY967725|nucleocapsid protein [Wencheng Sm shrew coronavirus]
acc|GENBANK|ASF90489.1|NEIGHBOR|KY967733|nucleocapsid protein [Wencheng Sm shrew coronavirus]
acc|GENBANK|AKZ66475.1|NEIGHBOR|KP849472|nucleocapsid protein [Alphacoronavirus 1]
acc|GENBANK|ADI80526.1|GENBANK|HM245926|nucleocapsid protein [Mink coronavirus strain WD1133]
acc|GENBANK|BAP75906.1|GENBANK|LC005736|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|BAS25714.1|GENBANK|LC029419|nucleocapsid protein [Ferret coronavirus]
acc|GENBANK|AEM44896.1|GENBANK|JF260915|nucleocapsid glycoprotein [Ferret coronavirus 4E98]
acc|GENBANK|AYR18404.1|GENBANK|MH687934|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|AYR18453.1|GENBANK|MH687942|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|AYR18509.1|GENBANK|MH687952|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QCX35164.1|GENBANK|MK720944|nucleocapsid protein [Tylonycteris bat coronavirus HKU33]
acc|GENBANK|QCX35174.1|GENBANK|MK720945|nucleocapsid protein [Rhinolophus bat coronavirus HKU32]
acc|GENBANK|AFU92074.1|NEIGHBOR|JQ989266|nucleocapsid protein [Hipposideros bat coronavirus HKU10]
acc|GENBANK|AFU92099.1|NEIGHBOR|JQ989269|nucleocapsid protein [Hipposideros bat coronavirus HKU10]
acc|GENBANK|QBP43263.1|NEIGHBOR|MG916901|N protein [Bat coronavirus]
acc|GENBANK|QBP43274.1|NEIGHBOR|MG916902|N protein [Bat coronavirus]
acc|GENBANK|QBP43296.1|NEIGHBOR|MG916904|N protein [Bat coronavirus]
acc|GENBANK|QDE55569.1|GENBANK|MG923574|nucleocapsid protein [Bat alphacoronavirus]
acc|GENBANK|QHB49082.1|GENBANK|MN488618|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QHB49083.1|GENBANK|MN488619|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QHB49088.1|GENBANK|MN488624|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|ACA52161.1|NEIGHBOR|EU420137|nucleocapsid protein [Bat coronavirus 1B]
acc|GENBANK|ANF07130.1|GENBANK|KR265176|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|ANF07131.1|GENBANK|KR265177|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|ANF07140.1|GENBANK|KR265186|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|QDH43732.1|GENBANK|MN026166|nucleocapsid protein [Human coronavirus NL63]
acc|GENBANK|QER90708.1|GENBANK|MN065811|nucleocapsid protein [Bat alphacoronavirus]
acc|GENBANK|AJD09530.1|GENBANK|KJ857407|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QHA24669.1|GENBANK|MN611517|nucleocapsid protein [Rousettus aegyptiacus bat coronavirus 229E-related]
acc|GENBANK|QHA24675.1|GENBANK|MN611518|nucleocapsid protein [Miniopterus pusillus bat coronavirus HKU8-related]
acc|GENBANK|QHA24700.1|GENBANK|MN611521|nucleocapsid protein [Scotophilus kuhlii bat coronavirus 512-related]
acc|GENBANK|QHA24707.1|GENBANK|MN611522|nucleocapsid protein [Rhinolophus affinis bat coronavirus HKU2-related]
acc|GENBANK|QHA24722.1|GENBANK|MN611524|nucleocapsid protein [Miniopterus schreibersii bat coronavirus 1-related]
acc|GENBANK|QHA24728.1|GENBANK|MN611525|nucleocapsid protein [Hipposideros pomona bat coronavirus CHB25]
acc|GENBANK|AAS68177.1|GENBANK|AY539715|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|ALA50092.1|NEIGHBOR|KT368892|nucleocapsid protein [Camel alphacoronavirus]
acc|GENBANK|ALA50169.1|NEIGHBOR|KT368903|nucleocapsid protein [Camel alphacoronavirus]
acc|GENBANK|QOE77273.1|NEIGHBOR|MT820625|nucleocapsid phosphoprotein [Lucheng Rn rat coronavirus]
acc|GENBANK|QOE77292.1|NEIGHBOR|MT820627|nucleocapsid phosphoprotein [Lucheng Rn rat coronavirus]
acc|GENBANK|QLE11829.1|GENBANK|MT663548|nucleocapsid protein [Bat alphacoronavirus]
acc|GENBANK|AIA62275.1|NEIGHBOR|KJ473810|nucleocapsid protein [Alphacoronavirus BtMs-AlphaCoV/GS2013]
acc|GENBANK|ASV51729.1|NEIGHBOR|MF577027|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AAS98733.1|GENBANK|AY563107|nucleocapsid protein [Human coronavirus 3363/2000/NL]
acc|GENBANK|ATP66741.1|GENBANK|KY370045|nucleocapsid protein [Rodent coronavirus]
acc|GENBANK|QEO75989.1|NEIGHBOR|MN369046|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QBF53922.1|GENBANK|MH744253|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QBF53929.1|GENBANK|MH744260|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QBF53930.1|GENBANK|MH744261|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|ABG75578.1|GENBANK|DQ666343|nucleocapsid [Bat coronavirus HKU7]
acc|GENBANK|ADR79375.1|GENBANK|HQ585082|nucleocapsid [Alphacoronavirus Eptesicus fuscus/Appalachian]
acc|GENBANK|QBG64642.1|GENBANK|MK249068|nucleocapsid [Alphacoronavirus PLMg1]
acc|GENBANK|QBG64652.1|GENBANK|MK249069|nucleocapsid [Alphacoronavirus UKMa1]
acc|GENBANK|AUG98080.1|GENBANK|KY566172|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AUG98084.1|GENBANK|KY566176|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AUG98106.1|GENBANK|KY566198|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AGT45943.1|GENBANK|KF435071|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AGW80680.1|GENBANK|KF293662|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|AIE16045.1|GENBANK|KF840559|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AIE16046.1|GENBANK|KF840560|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|ARI44792.1|GENBANK|KY770850|nucleocapsid protein [Bat coronavirus]
acc|GENBANK|ASL24656.1|NEIGHBOR|KY799179|N protein [Myotis lucifugus coronavirus]
acc|GENBANK|ANN12606.1|GENBANK|KX255651|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|ANN12607.1|GENBANK|KX268229|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|ALK28779.1|NEIGHBOR|KT253269|N [229E-related bat coronavirus]
acc|GENBANK|ALK28797.1|NEIGHBOR|KT253272|N [229E-related bat coronavirus]
acc|GENBANK|ACR10356.1|GENBANK|FJ917527|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ACT10882.1|NEIGHBOR|FJ938053|nucleocapsid protein [Feline coronavirus UU7]
acc|GENBANK|ADX59455.1|GENBANK|HQ728480|nucleocapsid protein [Cardioderma bat coronavirus/Kenya/KY43/2006]
acc|GENBANK|ADX59462.1|GENBANK|HQ728481|nucleocapsid protein [Chaerephon bat coronavirus/Kenya/KY41/2006]
acc|GENBANK|ADX59486.1|GENBANK|HQ728484|nucleocapsid protein [Miniopterus bat coronavirus/Kenya/KY27/2006]
acc|GENBANK|ADX59492.1|GENBANK|HQ728485|nucleocapsid protein [Miniopterus bat coronavirus/Kenya/KY33/2006]
acc|GENBANK|ADX59499.1|GENBANK|HQ728486|nucleocapsid protein [Chaerephon bat coronavirus/Kenya/KY22/2006]
