LENGTH	1844
LCA	Viruses::Riboviria::Pararnavirae::Artverviricota::Revtraviricetes::Ortervirales::Caulimoviridae
NBSEQ	138
KEYWORDS:
reverse	336
transcriptase	336
like	200
aspartyl	184
protease	184
domain	177
rnase	177
found	177
dependent	136
polymerase	136
dna	136
rna	136
retroviral	135
zinc	127
knuckle	125
virus	55
mosaic	55
peptidase	55
cauliflower	55
dutpase	30
protein	11
viral	11
movement	11
finger	2
grf	2
caulimovirus	1
viroplasmin	1
KEYWORDS FROM SEQUENCES:
virus	128
polyprotein	93
orf3	49
bacilliform	46
cacao	42
swollen	36
shoot	36
dioscorea	24
vein	16
yellow	11
streak	11
taro	11
associated	10
sugarcane	10
banana	10
banding	10
protein	9
badnavirus	9
mosaic	8
grapevine	6
red	6
citrus	6
clearing	6
leaf	5
ghana	5
togo	4
mottle	3
orf	2
putative	2
roll	2
chlorotic	2
green	2
pepper	2
net	2
fig	2
sichuan	2
birch	2
camellia	2
rubus	2
roditis	2
discoloration	2
bougainvillea	2
canna	2
hypothetical	1
and	1
unknown	1
iii	1
protease	1
ringspot	1
peru	1
subsp	1
mulberry	1
bamboo	1
pitaya	1
agave	1
epiphyllum	1
jujube	1
chestnut	1
pineapple	1
polyscias	1
rnaseh	1
codonopsis	1
aglaonema	1
orfiii	1
cayenensis	1
rotundata	1
enset	1
znf	1
piper	1
ivy	1
lemon	1
glow	1
paper	1
lucky	1
gooseberry	1
SEQUENCES:
acc|GENBANK|QBH21733.1|GENBANK|MH475918|polyprotein [Polyscias mosaic virus]
acc|GENBANK|CAE76628.1|NEIGHBOR|AJ608931|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|CAE81279.1|NEIGHBOR|AJ609019|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|CAE81285.1|NEIGHBOR|AJ609020|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|CAG70342.1|GENBANK|AJ781003|CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot Togo A virus]
acc|GENBANK|AKA45798.1|NEIGHBOR|KP710177|polyprotein [Taro bacilliform CH virus]
acc|GENBANK|QAX91646.1|GENBANK|MK044821|ORF3 [Codonopsis vein clearing virus]
acc|GENBANK|AVA17857.1|NEIGHBOR|MG686420|polyprotein [Birch leaf roll-associated virus]
acc|GENBANK|ACE76858.1|NEIGHBOR|EU708316|polyprotein [Citrus yellow mosaic virus]
acc|GENBANK|ACE76864.1|NEIGHBOR|EU708317|polyprotein [Citrus yellow mosaic virus]
acc|GENBANK|QEG78874.1|NEIGHBOR|MK473389|polyprotein [Bougainvillea chlorotic vein banding virus]
acc|GENBANK|AVA17861.1|NEIGHBOR|MG686421|polyprotein [Birch leaf roll-associated virus]
acc|GENBANK|AYD60109.1|NEIGHBOR|MG711311|ORF3 protein [Dioscorea bacilliform RT virus]
acc|GENBANK|QBA88842.1|GENBANK|MH384837|polyprotein [Aglaonema bacilliform virus]
acc|GENBANK|ATW01249.1|NEIGHBOR|MF476845|ORF3 protein [Dioscorea bacilliform RT virus]
acc|GENBANK|ABE27943.1|NEIGHBOR|DQ451009|ORFIII [Banana streak virus]
acc|GENBANK|QBB63967.1|GENBANK|MK371353|polyprotein [Green Sichuan pepper vein clearing-associated virus]
acc|GENBANK|QBB63970.1|GENBANK|MK371354|polyprotein [Green Sichuan pepper vein clearing-associated virus]
acc|GENBANK|QCT85336.1|NEIGHBOR|MK816926|polyprotein [Bougainvillea chlorotic vein banding virus]
acc|GENBANK|QED42786.1|GENBANK|MH898467|ORF3 [Agave badnavirus A]
acc|GENBANK|QED42803.1|GENBANK|MH898490|ORF3 [Dioscorea badnavirus A]
acc|GENBANK|QIM56922.1|NEIGHBOR|MN179342|ORF3 polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QIM56926.1|GENBANK|MN179343|ORF3 polyprotein [Cacao swollen shoot Togo B virus]
acc|GENBANK|QIM56931.1|GENBANK|MN179344|ORF3 polyprotein [Cacao swollen shoot Togo B virus]
acc|GENBANK|QIE05265.1|GENBANK|MN187554|polyprotein [Banana streak Peru virus]
acc|GENBANK|AVT44083.1|NEIGHBOR|KY971493|polyprotein [Canna yellow mottle virus]
acc|GENBANK|ATV81254.1|GENBANK|MF781082|polyprotein [Grapevine badnavirus 1]
acc|GENBANK|QJC63475.1|NEIGHBOR|MN433933|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63479.1|NEIGHBOR|MN433934|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63483.1|NEIGHBOR|MN433935|polyprotein [Cacao swollen shoot CD virus]
acc|GENBANK|QJC63488.1|NEIGHBOR|MN433936|polyprotein [Cacao swollen shoot CD virus]
acc|GENBANK|QJC63493.1|NEIGHBOR|MN433937|polyprotein [Cacao swollen shoot CD virus]
acc|GENBANK|QJC63498.1|NEIGHBOR|MN433938|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63503.1|NEIGHBOR|MN433939|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63520.1|NEIGHBOR|MN433942|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63526.1|NEIGHBOR|MN433943|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63571.1|NEIGHBOR|MN433952|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63581.1|NEIGHBOR|MN433954|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63621.1|NEIGHBOR|MN433962|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|AEV42076.1|NEIGHBOR|GQ398110|putative polyprotein [Pineapple bacilliform CO virus]
acc|GENBANK|AHJ80144.1|NEIGHBOR|KF724854|P3 polyprotein [Banana streak MY virus]
acc|GENBANK|AHJ80147.1|NEIGHBOR|KF724855|P3 polyprotein [Banana streak MY virus]
acc|GENBANK|AJF46484.1|GENBANK|KJ624754|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|QBB19900.1|NEIGHBOR|MH319693|polyprotein [Grapevine vein clearing virus]
acc|GENBANK|QHG11155.1|GENBANK|MK991812|polyprotein [Pitaya badnavirus 1]
acc|GENBANK|ANK58536.1|NEIGHBOR|KT809303|polyprotein [Fig badnavirus 1]
acc|GENBANK|ABI47986.1|NEIGHBOR|DQ822074|ORF3 protein [Dioscorea bacilliform virus]
acc|GENBANK|AHM92948.1|NEIGHBOR|KJ013506|polyprotein [Banana streak OL virus]
acc|GENBANK|AHM92951.1|NEIGHBOR|KJ013507|polyprotein [Banana streak GF virus]
acc|GENBANK|AHM92954.1|NEIGHBOR|KJ013508|polyprotein [Banana streak IM virus]
acc|GENBANK|AHM92960.1|NEIGHBOR|KJ013510|polyprotein [Banana streak VN virus]
acc|GENBANK|AHM92963.1|NEIGHBOR|KJ013511|polyprotein [Banana streak CA virus]
acc|GENBANK|CAD59232.1|NEIGHBOR|AJ534983|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|AMN88380.1|NEIGHBOR|KT965859|polyprotein [Grapevine Roditis leaf discoloration-associated virus]
acc|GENBANK|ATZ69445.1|GENBANK|MF642716|ORF3 polyprotein [Cacao swollen shoot Togo A virus]
acc|GENBANK|ATZ69449.1|NEIGHBOR|MF642717|ORF3 polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ATZ69454.1|NEIGHBOR|MF642718|ORF3 polyprotein [Cacao swollen shoot CD virus]
acc|GENBANK|ATZ69459.1|NEIGHBOR|MF642719|ORF3 polyprotein [Cacao swollen shoot CE virus]
acc|GENBANK|ATZ69490.1|NEIGHBOR|MF642726|ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
acc|GENBANK|ATZ69494.1|NEIGHBOR|MF642727|ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
acc|GENBANK|ATZ69502.1|NEIGHBOR|MF642729|ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
acc|GENBANK|ATZ69506.1|NEIGHBOR|MF642730|ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
acc|GENBANK|ATZ69510.1|NEIGHBOR|MF642731|ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
acc|GENBANK|AYH52115.1|NEIGHBOR|MG948562|ORF 3 [Dioscorea bacilliform AL virus]
acc|GENBANK|ACB87150.1|NEIGHBOR|EU489744|polyprotein [Citrus yellow mosaic virus]
acc|GENBANK|ACB87156.1|NEIGHBOR|EU489745|polyprotein [Citrus yellow mosaic virus]
acc|GENBANK|AJW68048.1|GENBANK|KM214357|ORF3 [Sugarcane bacilliform virus]
acc|GENBANK|AJW68051.1|GENBANK|KM214358|ORF3 [Sugarcane bacilliform virus]
acc|GENBANK|AFO11486.1|GENBANK|JN377533|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AFO11489.1|GENBANK|JN377534|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AFO11492.1|GENBANK|JN377535|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AFO11495.1|GENBANK|JN377536|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AFO11498.1|GENBANK|JN377537|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AHG32725.1|GENBANK|KF830000|ORF3 [Dioscorea cayenensis subsp. rotundata]
acc|GENBANK|AYR16588.1|NEIGHBOR|MG833013|ORF3 [Taro bacilliform virus]
acc|GENBANK|AYR16591.1|NEIGHBOR|MG833014|ORF3 [Taro bacilliform CH virus]
acc|GENBANK|ASG91836.1|NEIGHBOR|KX592571|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91840.1|NEIGHBOR|KX592572|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91844.1|NEIGHBOR|KX592573|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91848.1|NEIGHBOR|KX592574|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91859.1|NEIGHBOR|KX592576|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91891.1|NEIGHBOR|KX592582|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91901.1|NEIGHBOR|KX592584|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASD56984.1|NEIGHBOR|KX610317|polyprotein [Grapevine vein clearing virus]
acc|GENBANK|QOJ56170.1|NEIGHBOR|MN245240|polyprotein [Rubus yellow net virus]
acc|GENBANK|QNH81994.1|GENBANK|MN274946|P3 [Jujube associated badnavirus]
acc|GENBANK|ANV20878.1|NEIGHBOR|KX008571|ORF3 protein [Dioscorea bacilliform AL virus]
acc|GENBANK|ANV20890.1|NEIGHBOR|KX008575|ORF3 protein [Dioscorea bacilliform RT virus]
acc|GENBANK|ANV20899.1|NEIGHBOR|KX008578|ORF3 protein [Dioscorea bacilliform RT virus]
acc|GENBANK|ANV20902.1|NEIGHBOR|KX008579|ORF3 protein [Dioscorea bacilliform RT virus]
acc|GENBANK|AXP07690.1|GENBANK|MF991909|ORF3 protein [Enset leaf streak virus]
acc|GENBANK|AWD78011.1|GENBANK|MF991952|ZnF [Grapevine Roditis leaf discoloration-associated virus]
acc|GENBANK|AXG50782.1|NEIGHBOR|MF996373|ORF3 [Piper yellow mottle virus]
acc|GENBANK|AVM13465.1|NEIGHBOR|MG017318|polyprotein [Taro bacilliform virus]
acc|GENBANK|AWK49022.1|NEIGHBOR|MG017322|ORF3 [Taro bacilliform virus]
acc|GENBANK|AWK49026.1|NEIGHBOR|MG017323|ORF3 [Taro bacilliform virus]
acc|GENBANK|AWK49030.1|NEIGHBOR|MG017324|ORF3 [Taro bacilliform CH virus]
acc|GENBANK|AWK49034.1|NEIGHBOR|MG017325|ORF3 [Taro bacilliform CH virus]
acc|GENBANK|AWK49038.1|NEIGHBOR|MG017326|ORF3 [Taro bacilliform CH virus]
acc|GENBANK|AWK49042.1|NEIGHBOR|MG017327|ORF3 [Taro bacilliform CH virus]
acc|GENBANK|QJF45520.1|GENBANK|MN850490|polyprotein [Ivy ringspot-associated virus]
acc|GENBANK|ASV59777.1|NEIGHBOR|MF074075|polyprotein [Canna yellow mottle virus]
acc|GENBANK|QOJ37922.1|GENBANK|MN716781|polyprotein [Grapevine vein clearing virus]
acc|GENBANK|ASA40120.1|NEIGHBOR|KY827394|ORF3 [Dioscorea bacilliform virus]
acc|GENBANK|ASA40123.1|NEIGHBOR|KY827395|ORF3 [Dioscorea bacilliform virus]
acc|GENBANK|QHF16180.1|GENBANK|MN542417|polyprotein [Camellia lemon glow virus]
acc|GENBANK|ARQ88056.1|NEIGHBOR|KY359389|polyprotein [Taro bacilliform CH virus]
acc|GENBANK|QBX57843.1|GENBANK|MK632870|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|QCA48073.1|GENBANK|MH785297|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48077.1|GENBANK|MH785298|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48081.1|GENBANK|MH785299|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48085.1|GENBANK|MH785300|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48093.1|GENBANK|MH785302|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48097.1|GENBANK|MH785303|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QBB68760.1|GENBANK|MH396440|polyprotein [Epiphyllum badnavirus 1]
acc|GENBANK|AYH52610.1|GENBANK|MH404155|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52613.1|GENBANK|MH404156|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52616.1|GENBANK|MH404157|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52619.1|GENBANK|MH404158|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52622.1|GENBANK|MH404159|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52628.1|GENBANK|MH404161|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52640.1|NEIGHBOR|MH404165|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|AYH52643.1|NEIGHBOR|MH404166|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|AYH52646.1|NEIGHBOR|MH404167|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|AYH52655.1|NEIGHBOR|MH404170|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|AYH52664.1|NEIGHBOR|MH404173|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|QRN45547.1|GENBANK|MW052244|P3 [Paper mulberry vein-banding virus]
acc|GENBANK|ABR01170.1|NEIGHBOR|EF494181|hypothetical protein [Lucky bamboo bacilliform virus]
acc|GENBANK|AHB61260.1|GENBANK|KF241951|polyprotein [Rubus yellow net virus]
acc|GENBANK|ACH86211.1|NEIGHBOR|EU884191|unknown [Citrus yellow mosaic virus]
acc|GENBANK|AMW92451.1|NEIGHBOR|KT895259|polyprotein [Banana streak virus]
acc|GENBANK|AHG94942.1|GENBANK|KF829952|ORF3 [Dioscorea bacilliform virus]
acc|GENBANK|QID59005.1|GENBANK|MT036049|putative polyprotein [Camellia-associated badnavirus]
acc|GENBANK|AER00538.1|NEIGHBOR|JN006805|ORF III [Citrus yellow mosaic virus]
acc|GENBANK|ACZ02411.1|GENBANK|FJ824814|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|QDR47991.1|NEIGHBOR|MK348055|polyprotein [Fig badnavirus 1]
acc|GENBANK|AEE39270.1|NEIGHBOR|HQ852248|polyprotein [Gooseberry vein banding associated virus]
acc|GENBANK|QOS14488.1|GENBANK|MT261366|polyprotein [Chestnut mosaic virus]
