LENGTH	388
LCA	Viruses::Riboviria::Orthornavirae::Pisuviricota::Pisoniviricetes::Nidovirales::Cornidovirineae::Coronaviridae
NBSEQ	129
KEYWORDS:
nucleocapsid	129
coronavirus	129
protein	2
family	2
effector	2
hopa1	2
KEYWORDS FROM SEQUENCES:
protein	106
nucleocapsid	106
coronavirus	82
bat	40
alphacoronavirus	31
229e	17
porcine	15
human	15
virus	14
epidemic	14
diarrhea	14
feline	13
related	13
canine	6
kenya	5
2006	5
nl63	5
miniopterus	4
kuhlii	4
hipposideros	4
ferret	4
nucleoprotein	3
wencheng	3
shrew	3
alphacov	3
pomona	2
rhinolophus	2
chaerephon	2
camel	2
rodent	2
scotophilus	2
hku10	2
cov	2
italy	2
phosphoprotein	2
rat	1
glycoprotein	1
2011	1
respiratory	1
cardioderma	1
ky43	1
ky41	1
ky27	1
ky33	1
ky22	1
alpaca	1
enteric	1
mink	1
china	1
2016	1
pusillus	1
hku8	1
tylonycteris	1
512	1
affinis	1
hku2	1
chb25	1
hku33	1
systemic	1
btms	1
gs2013	1
myotis	1
lucifugus	1
btnv	1
sc2013	1
3398	1
2015	1
uu24	1
rousettus	1
aegyptiacus	1
schreibersii	1
hku32	1
btmr	1
sax2011	1
2008	1
206645	1
lucheng	1
camel229e	1
eptesicus	1
fuscus	1
2000	1
accov	1
jc34	1
ukma1	1
ghanakwam	1
appalachian	1
hku7	1
4e98	1
3363	1
plmg1	1
uu7	1
SEQUENCES:
acc|GENBANK|ADX59455.1|GENBANK|HQ728480|nucleocapsid protein [Cardioderma bat coronavirus/Kenya/KY43/2006]
acc|GENBANK|ADX59462.1|GENBANK|HQ728481|nucleocapsid protein [Chaerephon bat coronavirus/Kenya/KY41/2006]
acc|GENBANK|ADX59486.1|GENBANK|HQ728484|nucleocapsid protein [Miniopterus bat coronavirus/Kenya/KY27/2006]
acc|GENBANK|ADX59492.1|GENBANK|HQ728485|nucleocapsid protein [Miniopterus bat coronavirus/Kenya/KY33/2006]
acc|GENBANK|ADX59499.1|GENBANK|HQ728486|nucleocapsid protein [Chaerephon bat coronavirus/Kenya/KY22/2006]
acc|GENBANK|AKV62623.1|NEIGHBOR|KR809885|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AIE16045.1|GENBANK|KF840559|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AIE16046.1|GENBANK|KF840560|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AHJ11039.1|GENBANK|KF898123|nucleocapsid [Porcine epidemic diarrhea virus]
acc|GENBANK|AAZ91442.1|GENBANK|DQ112226|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|QDM36992.1|NEIGHBOR|MN165107|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|QBF53922.1|GENBANK|MH744253|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QBF53929.1|GENBANK|MH744260|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QBF53930.1|GENBANK|MH744261|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AFI49435.1|NEIGHBOR|JQ410000|nucleocapsid protein [Alpaca respiratory coronavirus]
acc|GENBANK|ARE29963.1|NEIGHBOR|KY554967|nucleocapsid protein [Human coronavirus NL63]
acc|GENBANK|AUG98080.1|GENBANK|KY566172|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AUG98084.1|GENBANK|KY566176|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AUG98106.1|GENBANK|KY566198|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|AUG98114.1|GENBANK|KY566206|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|BAN67915.1|GENBANK|AB781789|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|QAS69032.1|NEIGHBOR|MH539766|nucleocapsid protein [Porcine enteric alphacoronavirus]
acc|GENBANK|APT69853.1|NEIGHBOR|KY369908|N [Human coronavirus 229E]
acc|GENBANK|ATP66741.1|GENBANK|KY370045|nucleocapsid protein [Rodent coronavirus]
acc|GENBANK|ATP66770.1|GENBANK|KY370050|nucleocapsid protein [Rodent coronavirus]
acc|GENBANK|ADL71481.1|NEIGHBOR|HQ012370|nucleocapsid protein [Feline coronavirus UU24]
acc|GENBANK|ADR79375.1|GENBANK|HQ585082|nucleocapsid [Alphacoronavirus Eptesicus fuscus/Appalachian]
acc|GENBANK|AGW80680.1|GENBANK|KF293662|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|AVY53339.1|GENBANK|MF113046|nucleocapsid protein [Alphacoronavirus Mink/China/1/2016]
acc|GENBANK|ASF90463.1|NEIGHBOR|KY967723|nucleocapsid protein [Wencheng Sm shrew coronavirus]
acc|GENBANK|ASF90473.1|NEIGHBOR|KY967725|nucleocapsid protein [Wencheng Sm shrew coronavirus]
acc|GENBANK|ASF90489.1|NEIGHBOR|KY967733|nucleocapsid protein [Wencheng Sm shrew coronavirus]
acc|GENBANK|QXT58306.1|GENBANK|MW122480|N protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QHA24669.1|GENBANK|MN611517|nucleocapsid protein [Rousettus aegyptiacus bat coronavirus 229E-related]
acc|GENBANK|QHA24675.1|GENBANK|MN611518|nucleocapsid protein [Miniopterus pusillus bat coronavirus HKU8-related]
acc|GENBANK|QHA24700.1|GENBANK|MN611521|nucleocapsid protein [Scotophilus kuhlii bat coronavirus 512-related]
acc|GENBANK|QHA24707.1|GENBANK|MN611522|nucleocapsid protein [Rhinolophus affinis bat coronavirus HKU2-related]
acc|GENBANK|QHA24714.1|GENBANK|MN611523|nucleocapsid protein [Hipposideros pomona bat coronavirus HKU10-related]
acc|GENBANK|QHA24722.1|GENBANK|MN611524|nucleocapsid protein [Miniopterus schreibersii bat coronavirus 1-related]
acc|GENBANK|QHA24728.1|GENBANK|MN611525|nucleocapsid protein [Hipposideros pomona bat coronavirus CHB25]
acc|GENBANK|AEM44896.1|GENBANK|JF260915|nucleocapsid glycoprotein [Ferret coronavirus 4E98]
acc|GENBANK|AAS68177.1|GENBANK|AY539715|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AAT45198.1|GENBANK|AY548235|nucleoprotein [Canine coronavirus]
acc|GENBANK|AAS98733.1|GENBANK|AY563107|nucleocapsid protein [Human coronavirus 3363/2000/NL]
acc|GENBANK|AYP73643.1|NEIGHBOR|MG546689|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|ADC34645.1|GENBANK|GU017102|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ADC34656.1|GENBANK|GU017113|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|ALK28779.1|NEIGHBOR|KT253269|N [229E-related bat coronavirus]
acc|GENBANK|ALK28791.1|NEIGHBOR|KT253271|N [229E-related bat coronavirus]
acc|GENBANK|ALK28797.1|NEIGHBOR|KT253272|N [229E-related bat coronavirus]
acc|GENBANK|AOI28262.1|NEIGHBOR|KT253324|N [Camel alphacoronavirus Camel229E]
acc|GENBANK|ANV78634.1|GENBANK|KT346372|nucleocapsid protein [Scotophilus kuhlii coronavirus]
acc|GENBANK|AMM42511.1|GENBANK|KT359752|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|AMM42528.1|GENBANK|KT359769|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QWN56277.1|GENBANK|MZ081383|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QWN56287.1|GENBANK|MZ081384|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QWN56330.1|GENBANK|MZ081388|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QWN56338.1|GENBANK|MZ081389|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QWN56346.1|GENBANK|MZ081390|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QWN56354.1|GENBANK|MZ081391|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QWN56363.1|GENBANK|MZ081392|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QWN56398.1|GENBANK|MZ081396|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QWN56405.1|GENBANK|MZ081397|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QWN56412.1|GENBANK|MZ081398|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QCX35164.1|GENBANK|MK720944|nucleocapsid protein [Tylonycteris bat coronavirus HKU33]
acc|GENBANK|QCX35174.1|GENBANK|MK720945|nucleocapsid protein [Rhinolophus bat coronavirus HKU32]
acc|GENBANK|ADD49353.1|GENBANK|GU338456|nucleocapsid [Ferret systemic coronavirus]
acc|GENBANK|ANN12606.1|GENBANK|KX255651|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QBG64642.1|GENBANK|MK249068|nucleocapsid [Alphacoronavirus PLMg1]
acc|GENBANK|QBG64652.1|GENBANK|MK249069|nucleocapsid [Alphacoronavirus UKMa1]
acc|GENBANK|AIA62275.1|NEIGHBOR|KJ473810|nucleocapsid protein [Alphacoronavirus BtMs-AlphaCoV/GS2013]
acc|GENBANK|BAP75906.1|GENBANK|LC005736|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|BAS25714.1|GENBANK|LC029419|nucleocapsid protein [Ferret coronavirus]
acc|GENBANK|AFJ54358.1|GENBANK|JQ723737|N protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QQJ42202.1|GENBANK|MN482242|N protein [Bat coronavirus]
acc|GENBANK|QQJ42208.1|GENBANK|MN482243|N protein [Bat coronavirus]
acc|GENBANK|QHB49082.1|GENBANK|MN488618|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QHB49083.1|GENBANK|MN488619|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QWO79054.1|GENBANK|MN535732|N protein [Bat coronavirus]
acc|GENBANK|QWO79066.1|GENBANK|MN535734|N protein [Bat coronavirus]
acc|GENBANK|ACR10356.1|GENBANK|FJ917527|nucleocapsid protein [Feline coronavirus]
acc|GENBANK|QLE11829.1|GENBANK|MT663548|nucleocapsid protein [Bat alphacoronavirus]
acc|GENBANK|QVW10141.1|GENBANK|MZ218060|N protein [Bat coronavirus]
acc|GENBANK|ACA52161.1|NEIGHBOR|EU420137|nucleocapsid protein [Bat coronavirus 1B]
acc|GENBANK|ASV51729.1|NEIGHBOR|MF577027|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|AYF53099.1|GENBANK|MH817484|nucleoprotein [Feline alphacoronavirus 1]
acc|GENBANK|ASL24656.1|NEIGHBOR|KY799179|N protein [Myotis lucifugus coronavirus]
acc|REFSEQ|YP_009256201.1|REFSEQ|NC_030292|nucleocapsid protein [Ferret coronavirus]
acc|REFSEQ|YP_009201734.1|REFSEQ|NC_028833|nucleocapsid protein [BtNv-AlphaCoV/SC2013]
acc|REFSEQ|YP_009199613.1|REFSEQ|NC_028811|nucleocapsid protein [BtMr-AlphaCoV/SAX2011]
acc|REFSEQ|YP_009328939.1|REFSEQ|NC_032107|N protein [NL63-related bat coronavirus]
acc|REFSEQ|YP_009380526.1|REFSEQ|NC_034972|nucleocapsid protein [Coronavirus AcCoV-JC34]
acc|REFSEQ|YP_009755894.1|REFSEQ|NC_046964|nucleocapsid protein [Alphacoronavirus Bat-CoV/P.kuhlii/Italy/3398-19/2015]
acc|REFSEQ|YP_009824971.1|REFSEQ|NC_048216|N protein [NL63-related bat coronavirus]
acc|GENBANK|ACS44223.1|NEIGHBOR|GQ152141|N [Feline coronavirus]
acc|GENBANK|AYR18453.1|GENBANK|MH687942|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|AYR18509.1|GENBANK|MH687952|nucleocapsid protein [Alphacoronavirus sp.]
acc|GENBANK|QBP43274.1|NEIGHBOR|MG916902|N protein [Bat coronavirus]
acc|GENBANK|QBP43296.1|NEIGHBOR|MG916904|N protein [Bat coronavirus]
acc|GENBANK|QDE55569.1|GENBANK|MG923574|nucleocapsid protein [Bat alphacoronavirus]
acc|GENBANK|ALA50169.1|NEIGHBOR|KT368903|nucleocapsid protein [Camel alphacoronavirus]
acc|GENBANK|ABG75578.1|GENBANK|DQ666343|nucleocapsid [Bat coronavirus HKU7]
acc|GENBANK|QTE76076.1|NEIGHBOR|MW249018|nucleocapsid protein [Bat coronavirus]
acc|GENBANK|QEO75989.1|NEIGHBOR|MN369046|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|ACN78944.1|GENBANK|FJ710056|nucleoprotein [Bat coronavirus Hipposideros/GhanaKwam/19/2008]
acc|GENBANK|QVL91817.1|GENBANK|MW591993|nucleocapsid phosphoprotein [Canine coronavirus]
acc|GENBANK|QED40655.1|NEIGHBOR|MK841494|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|QDH43732.1|GENBANK|MN026166|nucleocapsid protein [Human coronavirus NL63]
acc|GENBANK|QER90708.1|GENBANK|MN065811|nucleocapsid protein [Bat alphacoronavirus]
acc|GENBANK|AFU92074.1|NEIGHBOR|JQ989266|nucleocapsid protein [Hipposideros bat coronavirus HKU10]
acc|GENBANK|ABE73420.1|GENBANK|DQ462763|nucleocapsid protein [Human coronavirus NL63]
acc|GENBANK|ARI44792.1|GENBANK|KY770850|nucleocapsid protein [Bat coronavirus]
acc|GENBANK|AZF86122.1|GENBANK|MH938448|nucleocapsid protein [Alphacoronavirus Bat-CoV/P.kuhlii/Italy/206645-41/2011]
acc|GENBANK|APD51503.1|NEIGHBOR|KY073747|N protein [229E-related bat coronavirus]
acc|GENBANK|APD51511.1|NEIGHBOR|KY073748|N protein [229E-related bat coronavirus]
acc|GENBANK|ANF07130.1|GENBANK|KR265176|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|ANF07131.1|GENBANK|KR265177|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|ANF07140.1|GENBANK|KR265186|nucleocapsid protein [Canine coronavirus]
acc|GENBANK|AJD09530.1|GENBANK|KJ857407|nucleocapsid protein [Porcine epidemic diarrhea virus]
acc|GENBANK|ACT10882.1|NEIGHBOR|FJ938053|nucleocapsid protein [Feline coronavirus UU7]
acc|GENBANK|QOE77292.1|NEIGHBOR|MT820627|nucleocapsid phosphoprotein [Lucheng Rn rat coronavirus]
acc|GENBANK|ANA96052.1|GENBANK|KU182966|nucleocapsid protein [Bat coronavirus]
acc|GENBANK|QGX41949.1|GENBANK|MK472067|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41961.1|GENBANK|MK472068|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41967.1|GENBANK|MK472069|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41955.1|GENBANK|MK472070|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|QGX41973.1|GENBANK|MK472071|nucleocapsid [Alphacoronavirus sp.]
acc|GENBANK|ANN12607.1|GENBANK|KX268229|nucleocapsid protein [Human coronavirus 229E]
acc|GENBANK|QXF78499.1|GENBANK|MT492212|nucleocapsid protein [Human coronavirus 229E]
