LENGTH	1601
LCA	Viruses::Riboviria::Pararnavirae::Artverviricota::Revtraviricetes::Ortervirales::Retroviridae::Orthoretrovirinae
NBSEQ	73
KEYWORDS:
domain	273
integrase	177
reverse	141
transcriptase	141
dna	123
binding	114
zinc	80
dependent	72
rna	72
polymerase	72
rnase	70
thumb	69
core	63
gag	37
protein	29
retroviral	21
terminal	19
p24	19
protease	11
dutpase	11
aspartyl	11
polyprotein	9
viral	9
finger	9
p10	9
knuckle	8
patch	8
envelope	2
glycoprotein	1
viruses	1
retro	1
transcribing	1
KEYWORDS FROM SEQUENCES:
pol	51
protein	29
virus	26
retrovirus	24
polymerase	16
avian	14
homo	13
sapiens	13
pro	13
gag	12
endogenous	10
leukosis	10
polyprotein	9
simian	8
human	5
tumor	5
precursor	5
reverse	4
transcriptase	4
sheep	4
mammary	4
jaagsiekte	4
enzootic	4
nasal	4
ovis	4
aries	4
disease	3
mouse	3
musculus	3
tumour	3
lymphoproliferative	3
myeloblastosis	3
associated	2
putative	2
monkey	2
type	2
dna	2
dog	2
mus	2
integrase	2
goats	2
prairie	2
rufogriseus	2
viral	1
black	1
and	1
bovine	1
ovine	1
truncated	1
desmodus	1
rotundus	1
env	1
squirrel	1
mason	1
chlorocebus	1
sarcoma	1
prosimian	1
syrian	1
hamster	1
mtv1	1
rous	1
eav	1
sabaeus	1
trichosurus	1
vulpecula	1
gunnison	1
notamacropus	1
pfizer	1
retroviridae	1
ch15	1
pr160	1
SEQUENCES:
acc|GENBANK|AED98689.1|NEIGHBOR|HQ900844|pol protein [Avian leukosis virus]
acc|GENBANK|AHI49963.1|NEIGHBOR|KF866225|polymerase polyprotein [Avian leukosis virus]
acc|GENBANK|AAB07711.1|GENBANK|U47118|polymerase [Human endogenous retrovirus]
acc|GENBANK|AAC97565.1|NEIGHBOR|U85505|polymerase [Simian endogenous retrovirus]
acc|GENBANK|AAC97567.1|GENBANK|U85506|polymerase [Simian endogenous retrovirus]
acc|GENBANK|AYN07284.1|NEIGHBOR|MF805807|pol protein [Simian retrovirus 2]
acc|GENBANK|AYN55365.1|NEIGHBOR|MF817820|polymerase [Avian leukosis virus]
acc|GENBANK|AOS48105.1|NEIGHBOR|KU605778|pol protein [Simian retrovirus 8]
acc|GENBANK|QIB89443.1|NEIGHBOR|MN161849|gag-pro-pol polyprotein [Jaagsiekte sheep retrovirus]
acc|GENBANK|AAF88167.1|GENBANK|AF074086|polymerase [Homo sapiens]
acc|GENBANK|AAC63290.1|GENBANK|AF080229|polymerase [Homo sapiens]
acc|GENBANK|AAC63291.1|GENBANK|AF080231|polymerase [Homo sapiens]
acc|GENBANK|AAC63292.1|GENBANK|AF080232|polymerase [Homo sapiens]
acc|GENBANK|AAD51791.1|GENBANK|AF164609|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAD51793.1|GENBANK|AF164611|Gag-Pro-Pol-Env protein [Homo sapiens]
acc|GENBANK|AAD51796.1|GENBANK|AF164613|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAD51797.1|GENBANK|AF164614|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAD51799.1|GENBANK|AF164615|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAL60056.1|GENBANK|AF333072|pol protein [Homo sapiens]
acc|GENBANK|AAM81188.1|GENBANK|AF480924|pol protein [Homo sapiens]
acc|GENBANK|BAP46324.1|GENBANK|AB935214|pol protein [Chlorocebus sabaeus]
acc|GENBANK|AAO27434.1|GENBANK|AY186778|polymerase [Homo sapiens]
acc|GENBANK|ABG91576.1|GENBANK|DQ821442|reverse transcriptase [Homo sapiens]
acc|GENBANK|ABD97982.1|GENBANK|DQ436346|putative gag-pol protein [Mus musculus]
acc|GENBANK|QNN81291.1|GENBANK|MT559331|pol [Mus musculus musculus]
acc|GENBANK|AGO59335.1|NEIGHBOR|KC189895|Pol [Ovine enzootic nasal tumor virus]
acc|GENBANK|BAG16457.1|NEIGHBOR|AB303223|polymerase [Avian leukosis virus]
acc|GENBANK|AOZ60515.1|NEIGHBOR|KU980910|gag-pro-pol [Enzootic nasal tumour virus of goats]
acc|GENBANK|AGV75852.1|GENBANK|KC802224|pol precursor polyprotein [Lymphoproliferative disease virus]
acc|GENBANK|QPD79268.1|NEIGHBOR|MT409624|pol protein [Avian leukosis virus]
acc|GENBANK|BAA03767.1|NEIGHBOR|D16249|gag pro pol polyprotein [Mouse mammary tumor virus]
acc|GENBANK|QDK64674.1|GENBANK|MK304634|pro-pol [Black Syrian hamster retrovirus]
acc|GENBANK|ACL14945.1|GENBANK|FJ041197|reverse transcriptase [Rous sarcoma virus]
acc|GENBANK|QEQ26602.1|NEIGHBOR|MK559457|pol protein [Enzootic nasal tumour virus of goats]
acc|GENBANK|QCT85317.1|NEIGHBOR|MK561030|pol protein [Squirrel monkey retrovirus]
acc|GENBANK|AAB31929.1|GENBANK|S74099|polyprotein II [Avian myeloblastosis virus]
acc|GENBANK|AAA62195.1|GENBANK|U09568|Pol precursor [Lymphoproliferative disease virus]
acc|GENBANK|AAA46304.1|GENBANK|L10922|pol [Avian myeloblastosis-associated virus type 1]
acc|GENBANK|AAA46307.1|GENBANK|L10924|pol [Avian myeloblastosis-associated virus type 2]
acc|GENBANK|AAF31464.1|NEIGHBOR|AF228550|Gag-Pro-Pol [Endogenous mouse mammary tumor virus Mtv1]
acc|GENBANK|AAG18012.1|GENBANK|AF248269|gag-pro-pol precursor protein [Human mammary tumor virus]
acc|GENBANK|QTI96652.1|GENBANK|MT787217|pol [Prosimian retrovirus 1]
acc|GENBANK|ABO60875.1|NEIGHBOR|EF467236|pol polyprotein [Avian leukosis virus]
acc|GENBANK|QLI47668.1|GENBANK|MT138119|pol polyprotein [Retroviridae sp.]
acc|GENBANK|QKU38051.1|GENBANK|MT361316|Pol [Gunnison's prairie dog retrovirus]
acc|GENBANK|QKU38055.1|GENBANK|MT361317|Pol [Endogenous prairie dog retrovirus]
acc|GENBANK|AAF29458.1|GENBANK|AF153615|Pol [Ovis aries]
acc|GENBANK|AAF36395.1|GENBANK|AF224725|pol polyprotein [Trichosurus vulpecula]
acc|GENBANK|ABV71074.1|GENBANK|EF680298|Pol protein [Ovis aries]
acc|GENBANK|ABV71109.1|GENBANK|EF680308|Pol protein [Ovis aries]
acc|GENBANK|ABV71118.1|GENBANK|EF680312|Pro-Pol [Ovis aries]
acc|GENBANK|BCW03412.1|GENBANK|LC631488|DNA polymerase [Notamacropus rufogriseus rufogriseus]
acc|REFSEQ|YP_009243641.1|REFSEQ|NC_029852|putative viral DNA polymerase [Bovine retrovirus CH15]
acc|REFSEQ|YP_003864102.1|REFSEQ|NC_014474|pol protein [Simian retrovirus 4]
acc|REFSEQ|NP_056891.1|REFSEQ|NC_001550|RT-IN [Mason-Pfizer monkey virus]
acc|GENBANK|AAK38686.1|NEIGHBOR|AF357971|polymerase [Jaagsiekte sheep retrovirus]
acc|GENBANK|CAF25156.1|NEIGHBOR|AJ623289|reverse transcriptase/integrase [Avian endogenous retrovirus EAV-HP]
acc|GENBANK|BBG56792.1|GENBANK|LC426347|pol protein [Simian retrovirus 5]
acc|GENBANK|ADO34852.1|NEIGHBOR|HM452342|polymerase polyprotein [Avian leukosis virus]
acc|GENBANK|BAM71050.1|GENBANK|AB611707|pol protein [Simian retrovirus Y]
acc|GENBANK|BAK64240.1|GENBANK|AB617817|polymerase [Avian leukosis virus]
acc|GENBANK|AJG42161.1|NEIGHBOR|KP284572|Pol [Avian leukosis virus ev/J]
acc|GENBANK|QCY65254.1|GENBANK|MK164396|pol protein [Enzootic nasal tumour virus 2]
acc|GENBANK|CAA45618.1|GENBANK|X64337|Reverse Transcriptase-and Integrase precursor [Lymphoproliferative disease virus]
acc|GENBANK|CAA71417.1|GENBANK|Y10391|pol protein [Human endogenous retrovirus K]
acc|GENBANK|CAA76879.1|GENBANK|Y17832|pol protein [Human endogenous retrovirus K]
acc|GENBANK|CAA76882.1|GENBANK|Y17833|pol protein [Human endogenous retrovirus K]
acc|GENBANK|AAA47732.1|NEIGHBOR|M11841|pol protein [Simian retrovirus 1]
acc|GENBANK|AAA46542.1|NEIGHBOR|M15122|Pr160 gag pro pol precursor [Mouse mammary tumor virus]
acc|GENBANK|AFV99544.1|GENBANK|JX848322|pol protein [Avian leukosis virus]
acc|GENBANK|AKE78833.1|NEIGHBOR|KP691837|pol protein [Jaagsiekte sheep retrovirus]
acc|GENBANK|AJR27940.1|GENBANK|KP175583|truncated pol [Desmodus rotundus endogenous retrovirus]
acc|GENBANK|AAA46253.1|GENBANK|M65014|pol protein [Jaagsiekte sheep retrovirus]
