LENGTH	1356
LCA	Viruses
NBSEQ	185
KEYWORDS:
rna	537
viral	332
superfamily	203
polymerase	181
dependent	181
helicase	175
methyltransferase	157
2og	28
oxygenase	28
KEYWORDS FROM SEQUENCES:
virus	163
rna	106
replicase	85
polymerase	52
mosaic	50
dependent	49
garlic	34
protein	27
replication	21
rdrp	17
yellow	15
alphaflexivirus	14
associated	13
putative	13
mild	9
like	8
cassava	8
potato	8
papaya	8
plantago	8
asiatica	7
alphaflexi	7
strawberry	6
orf1	6
edge	6
potexvirus	6
clover	5
pepino	5
common	5
hainan	5
citrus	4
asparagus	4
shallot	4
sediment	4
mottle	3
ringspot	3
vein	3
white	3
lily	3
guangxi	3
yam	3
cactus	3
aucuba	3
xinjiang	3
viral	2
actinidia	2
latent	2
clearing	2
polyprotein	2
sichuan	2
ambrosia	2
asymptomatic	2
alternanthera	2
cassia	2
mongolia	2
cymbidium	2
hosta	2
hydrangea	2
narcissus	2
vanilla	2
euonymus	2
inner	2
bamboo	2
mint	1
hypothetical	1
nandina	1
orf	1
hubei	1
alstroemeria	1
red	1
beijing	1
alfalfa	1
turtle	1
replicative	1
insect	1
zygocactus	1
yunnan	1
sclerotinia	1
sclerotiorum	1
indian	1
opuntia	1
galium	1
symptomless	1
senna	1
lolium	1
botrytis	1
dioscorea	1
botryosphaeria	1
dothidea	1
nerine	1
lettuce	1
cnidium	1
schlumbergera	1
mytcor	1
colombian	1
ash	1
arachis	1
pintoi	1
babaco	1
malva	1
blackberry	1
phaius	1
allium	1
tulip	1
tamus	1
lagenaria	1
sutera	1
flower	1
physalis	1
pitaya	1
phyllanthus	1
ferula	1
agave	1
yucca	1
cymodocea	1
escobaria	1
botrexvirus	1
pistachio	1
alphaendornavirus	1
grass	1
odoratum	1
foxtail	1
158kda	1
potex	1
SEQUENCES:
acc|GENBANK|AEI30838.1|NEIGHBOR|HQ663890|RNA-dependent RNA polymerase [Pepino mosaic virus]
acc|GENBANK|AEH03003.1|NEIGHBOR|HQ681906|RNA dependent RNA polymerase [Cymbidium mosaic virus]
acc|GENBANK|QRE02587.1|NEIGHBOR|MW013546|replicase [Garlic virus B]
acc|GENBANK|QWT83684.1|GENBANK|MW051786|replication-associated protein [Potato virus X]
acc|GENBANK|QWT83689.1|GENBANK|MW051787|replication-associated protein [Cactus virus X]
acc|GENBANK|AVG19341.1|NEIGHBOR|MF422612|RNA-dependent RNA polymerase [Pepino mosaic virus]
acc|GENBANK|BAE06191.1|NEIGHBOR|AB197937|RNA-dependent RNA polymerase [Cymbidium mosaic virus]
acc|GENBANK|AJO26405.1|NEIGHBOR|KP313241|putative RNA-dependent RNA polymerase [Citrus yellow vein clearing virus]
acc|GENBANK|BAU45629.1|NEIGHBOR|LC107515|RNA-dependent RNA polymerase [Alternanthera mosaic virus]
acc|GENBANK|BAU45634.1|NEIGHBOR|LC107516|RNA-dependent RNA polymerase [Hydrangea ringspot virus]
acc|GENBANK|QTW21059.1|NEIGHBOR|MT708137|ORF1 [Potato virus X]
acc|GENBANK|QTW21074.1|NEIGHBOR|MT708140|ORF1 [Potato virus X]
acc|GENBANK|BBG22487.1|NEIGHBOR|LC422371|RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
acc|GENBANK|BBU25160.1|NEIGHBOR|LC515235|replicase [Strawberry mild yellow edge virus]
acc|GENBANK|QJX15734.1|NEIGHBOR|MN399739|RNA replication protein [White clover mosaic virus]
acc|GENBANK|QIM41186.1|GENBANK|MN418120|replicase [Papaya virus A]
acc|GENBANK|QJS39010.1|NEIGHBOR|MN428639|RNA-dependent RNA polymerase [Cassava common mosaic virus]
acc|GENBANK|AAN46894.1|NEIGHBOR|AY121833|RNA-dependent RNA polymerase [Foxtail mosaic virus]
acc|GENBANK|ABQ96641.1|GENBANK|EF596816|replicase [Garlic virus B1]
acc|GENBANK|ABQ84434.1|NEIGHBOR|EF599605|RNA-dependent RNA polymerase [Pepino mosaic virus]
acc|GENBANK|QWT83779.1|GENBANK|MW248356|replication-associated protein [Lettuce virus X]
acc|GENBANK|QVW10161.1|NEIGHBOR|MW280188|replicase protein [Cnidium virus X]
acc|GENBANK|ALQ32664.1|NEIGHBOR|KT591184|ORF1 [Bamboo mosaic virus]
acc|GENBANK|AIL23155.1|NEIGHBOR|KJ544560|replicase [Asparagus virus 3]
acc|GENBANK|QED43971.1|NEIGHBOR|MN059252|replicase [Garlic virus A]
acc|GENBANK|QED43977.1|NEIGHBOR|MN059253|replicase [Garlic virus A]
acc|GENBANK|QED43995.1|NEIGHBOR|MN059256|replicase [Garlic virus A]
acc|GENBANK|QED44001.1|NEIGHBOR|MN059257|replicase [Garlic virus A]
acc|GENBANK|QED44145.1|NEIGHBOR|MN059281|replicase [Garlic virus A]
acc|GENBANK|QED44217.1|NEIGHBOR|MN059293|replicase [Garlic virus A]
acc|GENBANK|QED44253.1|NEIGHBOR|MN059299|replicase [Garlic virus A]
acc|GENBANK|QED44331.1|NEIGHBOR|MN059312|replicase [Garlic virus A]
acc|GENBANK|QED44379.1|NEIGHBOR|MN059320|replicase [Garlic virus A]
acc|GENBANK|QED44403.1|NEIGHBOR|MN059324|replicase [Garlic virus A]
acc|GENBANK|QED44409.1|NEIGHBOR|MN059325|replicase [Garlic virus A]
acc|GENBANK|QED44415.1|NEIGHBOR|MN059326|RdRp [Garlic virus E]
acc|GENBANK|QED44433.1|GENBANK|MN059329|replicase [Garlic virus F]
acc|GENBANK|QED44445.1|GENBANK|MN059331|replicase [Garlic virus G]
acc|GENBANK|QED44451.1|GENBANK|MN059332|replicase [Garlic virus H]
acc|GENBANK|QED44457.1|GENBANK|MN059333|replicase [Garlic virus I]
acc|GENBANK|QED44469.1|NEIGHBOR|MN059335|replicase [Garlic virus D]
acc|GENBANK|QED44517.1|NEIGHBOR|MN059343|replicase [Garlic virus D]
acc|GENBANK|QED44523.1|NEIGHBOR|MN059344|replicase [Garlic virus D]
acc|GENBANK|QED44673.1|NEIGHBOR|MN059369|replicase [Garlic virus D]
acc|GENBANK|QED44865.1|NEIGHBOR|MN059401|replicase [Garlic virus X]
acc|GENBANK|QED44877.1|NEIGHBOR|MN059403|replicase [Garlic virus X]
acc|GENBANK|QED44889.1|NEIGHBOR|MN059405|replicase [Garlic virus X]
acc|GENBANK|APL96675.1|GENBANK|KY123701|putative RNA-dependent RNA polymerase [Potato aucuba mosaic virus]
acc|GENBANK|UOF93351.1|GENBANK|OM867869|replication-associated protein [Alternanthera mosaic virus]
acc|GENBANK|AFI57885.1|NEIGHBOR|JF930326|RdRp [Zygocactus virus X]
acc|GENBANK|AFJ00093.1|NEIGHBOR|JF937699|RNA-dependent RNA polymerase [Cactus virus X]
acc|GENBANK|CAC28945.1|GENBANK|AJ308445|putative RNA-dependent RNA-polymerase [Pepino mosaic virus]
acc|GENBANK|UCR95342.1|GENBANK|MW454906|replicase [Sclerotinia sclerotiorum alphaflexivirus 1]
acc|GENBANK|QGT76798.1|GENBANK|MK957246|P1 [Citrus yellow mottle virus]
acc|GENBANK|AVL84357.1|NEIGHBOR|KY923700|RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
acc|GENBANK|QPL20132.1|NEIGHBOR|MT731500|replicase [Garlic virus D]
acc|GENBANK|UOF93052.1|GENBANK|OL584345|replication-associated protein [Schlumbergera virus X]
acc|GENBANK|UOF93078.1|GENBANK|OL584354|replication-associated protein [Clover yellow mosaic virus]
acc|GENBANK|AYN75557.1|GENBANK|MG210801|replicative protein [Mytcor virus 1]
acc|GENBANK|AHA91819.1|GENBANK|KC505252|replicase [Cassava Colombian symptomless virus]
acc|GENBANK|AGO03686.1|GENBANK|KC568202|RNA dependent RNA polymerase [Actinidia virus X]
acc|GENBANK|QIC35022.1|NEIGHBOR|MN864567|polymerase [Alfalfa virus S]
acc|GENBANK|AFV46461.1|GENBANK|JX524226|replicase [Papaya mosaic virus]
acc|GENBANK|AEV51805.1|GENBANK|JN019813|replicase [Garlic virus B]
acc|GENBANK|AEV51816.1|GENBANK|JN019814|replicase [Garlic virus C]
acc|GENBANK|ADE10202.1|NEIGHBOR|GQ265901|viral replicase [Hydrangea ringspot virus]
acc|GENBANK|AJD23416.1|GENBANK|KM009120|putative RNA-dependent RNA polymerase [Yam virus X]
acc|GENBANK|AEM23890.1|NEIGHBOR|HQ166713|replicase protein [Nerine virus X]
acc|GENBANK|ARG47557.1|GENBANK|KY288505|RNA-dependent RNA polymerase [Cassava virus X]
acc|REFSEQ|YP_009186834.1|REFSEQ|NC_028649|RNA-dependent RNA polymerase [Actinidia virus X]
acc|REFSEQ|YP_009357226.1|REFSEQ|NC_034375|RNA-dependent RNA polymerase [Cassava virus X]
acc|REFSEQ|YP_009270630.1|REFSEQ|NC_030746|RdRp [Senna mosaic virus]
acc|REFSEQ|YP_009328892.1|REFSEQ|NC_032104|RdRp [Arachis pintoi virus]
acc|REFSEQ|YP_009448187.1|REFSEQ|NC_036587|RdRp [Babaco mosaic virus]
acc|REFSEQ|YP_009389479.1|REFSEQ|NC_035205|RNA-dependent RNA polymerase [Vanilla virus X]
acc|REFSEQ|YP_009389473.1|REFSEQ|NC_035204|RNA-dependent RNA polymerase [Vanilla latent virus]
acc|REFSEQ|YP_009389419.1|REFSEQ|NC_035190|RdRp protein [Euonymus yellow vein virus]
acc|REFSEQ|YP_009046882.1|REFSEQ|NC_024458|RdRp [Pitaya virus X]
acc|REFSEQ|YP_009091814.1|REFSEQ|NC_025252|RNA dependent RNA polymerase [Yam virus X]
acc|REFSEQ|NP_040778.1|REFSEQ|NC_001441|replicase [Narcissus mosaic virus]
acc|REFSEQ|NP_203553.1|REFSEQ|NC_003093|putative RNA-dependent RNA polymerase RdRp [Indian citrus ringspot virus]
acc|REFSEQ|YP_263303.1|REFSEQ|NC_007192|replication protein [Lily virus X]
acc|REFSEQ|YP_667844.1|REFSEQ|NC_008251|ORF 1 [Malva mosaic virus]
acc|REFSEQ|YP_004659200.1|REFSEQ|NC_015706|replication-associated polyprotein [Blackberry virus E]
acc|REFSEQ|YP_224134.1|REFSEQ|NC_006948|replicase [Mint virus X]
acc|REFSEQ|NP_042695.1|REFSEQ|NC_001658|RNA-dependent RNA polymerase [Cassava common mosaic virus]
acc|REFSEQ|NP_569132.1|REFSEQ|NC_003376|replicase [Garlic virus C]
acc|REFSEQ|YP_054407.1|REFSEQ|NC_006060|replication-associated protein [Opuntia virus X]
acc|REFSEQ|NP_620836.1|REFSEQ|NC_003849|replicase [Plantago asiatica mosaic virus]
acc|REFSEQ|YP_001655010.1|REFSEQ|NC_010295|replicase protein [Phaius virus X]
acc|REFSEQ|YP_002647027.1|REFSEQ|NC_012211|replicase [Allium virus X]
acc|REFSEQ|NP_620648.1|REFSEQ|NC_003795|replicase [Shallot virus X]
acc|REFSEQ|NP_702988.1|REFSEQ|NC_004322|RNA-dependent RNA polymerase [Tulip virus X]
acc|REFSEQ|YP_001718499.1|REFSEQ|NC_010434|replicase [Lolium latent virus]
acc|REFSEQ|YP_001715612.1|REFSEQ|NC_010416|RNA dependent RNA polymerase [Asparagus virus 3]
acc|REFSEQ|NP_619745.1|REFSEQ|NC_003632|putative RNA-dependent RNA polymerase [Potato aucuba mosaic virus]
acc|REFSEQ|YP_002308464.1|REFSEQ|NC_011544|replicase [Hosta virus X]
acc|REFSEQ|NP_148778.1|REFSEQ|NC_002815|RNA-dependent RNA polymerase [Cactus virus X]
acc|REFSEQ|NP_570726.1|REFSEQ|NC_003400|RNA polymerase [Asparagus virus 3]
acc|REFSEQ|NP_932306.1|REFSEQ|NC_005132|158kDa replicase [Botrytis virus X]
acc|REFSEQ|YP_319827.1|REFSEQ|NC_007408|replicase protein [Alstroemeria virus X]
acc|REFSEQ|YP_004849314.1|REFSEQ|NC_016003|replicase [Tamus red mosaic virus]
acc|REFSEQ|YP_009664728.1|REFSEQ|NC_043079|RNA-dependent RNA polymerase [Lagenaria mild mosaic virus]
acc|REFSEQ|YP_009553670.1|REFSEQ|NC_040842|ORF1 [Potexvirus sp.]
acc|REFSEQ|YP_009552762.1|REFSEQ|NC_040644|RNA-dependent RNA polymerase [Turtle grass virus X]
acc|REFSEQ|YP_010087332.1|REFSEQ|NC_055542|putative RNA-dependent RNA polymerase [Ambrosia asymptomatic virus 1]
acc|REFSEQ|YP_010087744.1|REFSEQ|NC_055574|RNA-dependent RNA polymerase [Euonymus yellow mottle associated virus]
acc|GENBANK|UOF93370.1|GENBANK|ON012583|replication-associated protein [Sutera flower mottle virus]
acc|GENBANK|UOF93380.1|GENBANK|ON012585|replication-associated protein [Plantago yellow mosaic virus]
acc|GENBANK|QIQ53105.1|NEIGHBOR|MN519255|replicase [Hosta virus X]
acc|GENBANK|ATG34122.1|GENBANK|MF133526|RNA-dependent RNA polymerase [Potato aucuba mosaic virus]
acc|GENBANK|AMN10083.1|NEIGHBOR|KU697313|RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
acc|GENBANK|QBQ82430.1|GENBANK|MH752191|replicase [Lily virus X]
acc|GENBANK|QYA72407.1|GENBANK|MW854280|replication-associated protein [Shallot virus X]
acc|GENBANK|AAX19931.1|NEIGHBOR|AY800279|viral replicase [Nandina mosaic virus]
acc|GENBANK|ADI70508.1|GENBANK|GU906791|replicase [White ash mosaic virus]
acc|GENBANK|BAX03473.1|NEIGHBOR|LC155795|RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
acc|GENBANK|BAX03478.1|NEIGHBOR|LC155796|RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
acc|GENBANK|QZN83677.1|GENBANK|MZ326675|replicase [Strawberry mild yellow edge virus]
acc|GENBANK|QZN83678.1|GENBANK|MZ326676|replicase [Strawberry mild yellow edge virus]
acc|GENBANK|QZN83679.1|GENBANK|MZ326677|replicase [Strawberry mild yellow edge virus]
acc|GENBANK|QZN83683.1|GENBANK|MZ326681|replicase [Strawberry mild yellow edge virus]
acc|GENBANK|AZF99036.1|GENBANK|MH645156|orf1 [Papaya mosaic virus]
acc|GENBANK|AZF99041.1|GENBANK|MH645157|polymerase [Papaya mosaic virus]
acc|GENBANK|AHB59866.1|NEIGHBOR|KF752593|replicase [Narcissus mosaic virus]
acc|GENBANK|BAA61812.1|GENBANK|AB010301|replicase [Garlic virus B]
acc|GENBANK|AGG13288.1|GENBANK|JQ899446|replicase [Garlic virus A]
acc|GENBANK|AGG13294.1|NEIGHBOR|JQ899447|replicase [Garlic virus C]
acc|GENBANK|QYF50128.1|GENBANK|MW897253|polyprotein [Hainan alphaendornavirus 7]
acc|GENBANK|QYF50140.1|GENBANK|MW897273|putative replicase [Inner Mongolia alphaflexi-like virus 1]
acc|GENBANK|QYF50226.1|GENBANK|MW897274|putative replication protein [Beijing sediment alphaflexivirus]
acc|GENBANK|QYF50231.1|GENBANK|MW897276|putative replication protein [Hainan sediment alphaflexivirus 1]
acc|GENBANK|QYF50142.1|GENBANK|MW897277|putative replication protein [Sichuan alphaflexivirus 1]
acc|GENBANK|QYF50145.1|GENBANK|MW897278|RNA replication protein [Hainan alphaflexi-like virus]
acc|GENBANK|QYF50147.1|GENBANK|MW897279|replicase [Guangxi alphaflexivirus 1]
acc|GENBANK|QYF50148.1|GENBANK|MW897280|replicase [Guangxi alphaflexivirus 2]
acc|GENBANK|QYF50153.1|GENBANK|MW897284|replicase [Hainan alphaflexivirus 2]
acc|GENBANK|QYF50156.1|GENBANK|MW897285|RNA replication protein [Guangxi alphaflexi-like virus]
acc|GENBANK|QYF50159.1|GENBANK|MW897286|replicase [Sichuan alphaflexivirus 3]
acc|GENBANK|QYF50161.1|GENBANK|MW897287|replicase [Hainan sediment alphaflexivirus 3]
acc|GENBANK|QYF50163.1|GENBANK|MW897288|replicase [Inner Mongolia alphaflexi-like virus 3]
acc|GENBANK|QYF50164.1|GENBANK|MW897289|replicase [Xinjiang sediment alphaflexi-like virus 1]
acc|GENBANK|QYF50166.1|GENBANK|MW897290|replicase [Xinjiang alphaflexi-like virus 2]
acc|GENBANK|QYF50167.1|GENBANK|MW897291|replicase [Yunnan alphaflexivirus]
acc|GENBANK|QYF50236.1|GENBANK|MW897292|RNA replication protein [Xinjiang alphaflexivirus 2]
acc|GENBANK|UEP18559.1|GENBANK|MZ357185|RNA-dependent RNA polymerase [Physalis virus X]
acc|GENBANK|ADD65542.1|GENBANK|GU481094|replicase [Cassia mild mosaic virus]
acc|GENBANK|AAY87148.1|GENBANK|AY864849|replicase [Lily virus X]
acc|GENBANK|BDG15104.1|NEIGHBOR|LC682768|RNA-dependent RNA polymerase [Clover yellow mosaic virus]
acc|GENBANK|AGW45386.1|GENBANK|KF471012|RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
acc|GENBANK|QCY49525.1|NEIGHBOR|MH389250|replicase [Shallot virus X]
acc|GENBANK|QCY49531.1|NEIGHBOR|MH389251|replicase [Shallot virus X]
acc|GENBANK|QIL68840.1|GENBANK|MN265368|RNA-dependent RNA polymerase [Papaya virus X]
acc|GENBANK|QQG34565.1|GENBANK|MW328724|RdRp [Dioscorea potexvirus 1]
acc|GENBANK|QQG34570.1|GENBANK|MW328725|RdRp [Phyllanthus potexvirus 1]
acc|GENBANK|QQG34575.1|GENBANK|MW328726|RdRp [Ferula potexvirus 1]
acc|GENBANK|QQG34613.1|GENBANK|MW328740|RdRp [Agave potexvirus 1]
acc|GENBANK|QQG34618.1|GENBANK|MW328741|RdRp [Cymodocea alphaflexivirus 1]
acc|GENBANK|QQG34620.1|GENBANK|MW328742|RdRp [Yucca alphaflexivirus 1]
acc|GENBANK|AIJ49753.1|GENBANK|KJ815096|RNA-dependent RNA polymerase [Yam virus X]
acc|GENBANK|APG77761.1|GENBANK|KX883811|hypothetical protein [Hubei alphaflexi-like virus]
acc|GENBANK|QYL30857.1|NEIGHBOR|MW175326|RNA-dependent RNA polymerase [Cassava common mosaic virus]
acc|GENBANK|UJG81395.1|GENBANK|MW176088|RNA-dependent RNA polymerase [Citrus yellow vein clearing virus]
acc|GENBANK|ANC97808.2|NEIGHBOR|KT002439|RNA-dependent RNA polymerase [Cassava common mosaic virus]
acc|GENBANK|QHA79264.1|NEIGHBOR|MN203139|replicase [Papaya mosaic virus]
acc|GENBANK|QHA79269.1|NEIGHBOR|MN203140|replicase [Papaya mosaic virus]
acc|GENBANK|QHA79279.1|NEIGHBOR|MN203142|replicase [Papaya mosaic virus]
acc|GENBANK|QHB15107.1|GENBANK|MN203143|replicase [Insect-associated alphaflexivirus 1]
acc|GENBANK|CAA74273.1|GENBANK|Y13938|replicase [Strawberry mild yellow edge virus]
acc|GENBANK|AEA11495.1|GENBANK|HQ433256|RNA dependent RNA polymerase [Potato virus X]
acc|GENBANK|QEM20968.1|GENBANK|MN031278|ORF1 [Cassia mild mosaic virus]
acc|GENBANK|QED43054.1|NEIGHBOR|MN059098|RdRp [Asparagus virus 3]
acc|GENBANK|QED43305.1|NEIGHBOR|MN059141|replicase [Garlic virus C]
acc|GENBANK|AGC09135.1|GENBANK|JX997951|replicase [Garlic virus A]
acc|GENBANK|QLJ11034.1|NEIGHBOR|MT176428|RNA-dependent RNA polymerase [Clover yellow mosaic virus]
acc|GENBANK|AHB87027.1|GENBANK|KF421901|putative RNA-dependent RNA polymerase [Ambrosia asymptomatic virus 1]
acc|GENBANK|AHB87051.1|GENBANK|KF421918|putative RNA replicase [Escobaria virus]
acc|GENBANK|QQD86171.1|GENBANK|MT103578|replicase [Botryosphaeria dothidea botrexvirus 1]
acc|GENBANK|QIN54688.1|NEIGHBOR|MT111578|RNA-dependent RNA polymerase [Bamboo mosaic virus]
acc|GENBANK|QQY99973.1|GENBANK|MT151614|RNA replication protein [White clover mosaic virus]
acc|GENBANK|QPL17801.1|GENBANK|MT334614|RdRp [Pistachio potex-like virus]
acc|GENBANK|QPL17803.1|GENBANK|MT334616|RdRp [Cassava common mosaic virus]
acc|GENBANK|AAK61863.1|GENBANK|AF340024|replicase [Pepino mosaic virus]
acc|GENBANK|QJZ28428.1|GENBANK|MN814316|RNA replication protein [Galium odoratum potexvirus]
acc|GENBANK|QTU90392.1|NEIGHBOR|MT520806|replicase [Potato virus X]
