LENGTH	1308
LCA	cellular organisms::Eukaryota
NBSEQ	33
KEYWORDS:
domain	63
integrase	61
gag	59
rna	33
dependent	33
polymerase	33
dna	33
reverse	33
transcriptase	33
core	31
pre	30
type	29
polypeptide	29
ltr	29
copia	29
zinc	13
knuckle	13
unknown	2
function	2
duf4219	1
duf6598	1
KEYWORDS FROM SEQUENCES:
polyprotein	22
pol	15
gag	13
putative	7
protein	6
retrotransposon	5
glycine	5
max	5
zea	4
mays	4
copia	3
oryza	3
phyllostachys	3
edulis	3
arabidopsis	3
thaliana	3
like	2
integrase	2
vulgaris	2
sativa	2
dioica	2
phanerochaete	2
chrysosporium	2
protease	1
australiensis	1
type	1
japonicus	1
and	1
japonica	1
beta	1
persica	1
group	1
botrytis	1
helianthus	1
annuus	1
lotus	1
solanum	1
var	1
prunus	1
fragaria	1
brassica	1
phaseolus	1
medicago	1
oleracea	1
gossypium	1
momordica	1
ipomoea	1
batatas	1
rnaseh	1
barbadense	1
ty1	1
ananassa	1
chilense	1
bryonia	1
truncatula	1
SEQUENCES:
acc|GENBANK|AAC49502.1|GENBANK|U68408|Pol [Zea mays]
acc|GENBANK|CAA31653.1|GENBANK|X13291|polyprotein [Arabidopsis thaliana]
acc|GENBANK|BAA22288.1|GENBANK|D85597|polyprotein [Oryza australiensis]
acc|GENBANK|AAZ28935.1|GENBANK|DQ097838|polyprotein [Phanerochaete chrysosporium RP-78]
acc|GENBANK|AAZ28937.1|GENBANK|DQ097840|polyprotein [Phanerochaete chrysosporium RP-78]
acc|GENBANK|BAB03249.1|GENBANK|AB046118|polyprotein [Oryza sativa]
acc|GENBANK|BAD34493.1|GENBANK|AB162659|Gag-Pol [Ipomoea batatas]
acc|GENBANK|BAG72096.1|GENBANK|AB370254|Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
acc|GENBANK|AAD12997.1|GENBANK|AF082133|gag-pol polyprotein [Zea mays]
acc|GENBANK|AAD12998.1|GENBANK|AF082134|pol polyprotein [Zea mays]
acc|GENBANK|AAK29467.1|GENBANK|AF279585|polyprotein-like [Solanum chilense]
acc|GENBANK|AAM22635.1|GENBANK|AF434192|Gag and Pol [Zea mays]
acc|GENBANK|ADJ18449.1|GENBANK|HM365926|gag/pol protein [Bryonia dioica]
acc|GENBANK|CAX68207.1|GENBANK|FN298618|Copia-like retrotransposon [Helianthus annuus]
acc|GENBANK|AGW47867.1|GENBANK|KF303287|polyprotein [Phaseolus vulgaris]
acc|GENBANK|AIC77183.1|GENBANK|KF740825|polyprotein [Gossypium barbadense]
acc|GENBANK|USI00829.1|GENBANK|ON753198|retrotransposon protein, putative Ty1-copia [Oryza sativa Japonica Group]
acc|GENBANK|AHL77759.1|GENBANK|KJ150676|polyprotein [Prunus persica]
acc|GENBANK|AAO73521.1|GENBANK|AY205608|gag-pol polyprotein [Glycine max]
acc|GENBANK|AAO73523.1|GENBANK|AY205609|gag-pol polyprotein [Glycine max]
acc|GENBANK|AAO73529.1|GENBANK|AY205612|gag-pol polyprotein [Glycine max]
acc|GENBANK|AMY96445.1|GENBANK|KU052576|gag/pol protein [Momordica dioica]
acc|GENBANK|CAC37622.1|GENBANK|AJ292423|polyprotein [Arabidopsis thaliana]
acc|GENBANK|ABH07409.1|GENBANK|DQ482460|putative pol polyprotein [Brassica oleracea var. botrytis]
acc|GENBANK|ABH08430.1|GENBANK|DQ851167|putative integrase [Beta vulgaris]
acc|GENBANK|AAG52949.1|GENBANK|AY016208|gag/pol polyprotein [Arabidopsis thaliana]
acc|GENBANK|ACN78973.1|GENBANK|FJ225394|copia-type polyprotein [Glycine max]
acc|GENBANK|ACL97383.1|GENBANK|FJ544851|Gag-Pol polyprotein [Medicago truncatula]
acc|GENBANK|ACL97387.1|GENBANK|FJ544857|Gag-Pol polyprotein [Lotus japonicus]
acc|GENBANK|ACS74199.1|GENBANK|FJ871121|putative gag-pol polyprotein [Fragaria x ananassa]
acc|GENBANK|ADB85411.1|GENBANK|GQ252886|putative retrotransposon protein [Phyllostachys edulis]
acc|GENBANK|ADB85429.1|GENBANK|GQ252887|putative retrotransposon protein [Phyllostachys edulis]
acc|GENBANK|ADB85430.1|GENBANK|GQ252887|putative retrotransposon protein [Phyllostachys edulis]
