LENGTH	1815
LCA	Viruses::Riboviria::Pararnavirae::Artverviricota::Revtraviricetes::Ortervirales::Caulimoviridae::Badnavirus
NBSEQ	166
KEYWORDS:
reverse	405
transcriptase	405
like	242
domain	217
rnase	217
found	217
protease	212
aspartyl	212
rna	163
dependent	163
polymerase	163
dna	163
retroviral	162
zinc	149
knuckle	147
virus	62
mosaic	62
cauliflower	62
peptidase	62
dutpase	35
protein	8
viral	8
movement	8
finger	2
grf	2
caulimovirus	1
viroplasmin	1
KEYWORDS FROM SEQUENCES:
virus	149
polyprotein	112
orf3	56
bacilliform	54
cacao	48
swollen	36
shoot	36
dioscorea	27
vein	16
streak	15
yellow	14
banana	14
associated	13
badnavirus	13
mosaic	12
taro	12
banding	10
sugarcane	10
protein	8
grapevine	7
leaf	7
red	6
citrus	6
clearing	6
ghana	5
orf	4
jujube	4
togo	4
pineapple	4
rubus	4
net	4
orfiii	4
iii	3
mottle	3
pepper	3
mild	3
roditis	3
discoloration	3
theobroma	3
putative	2
roll	2
chlorotic	2
fig	2
camellia	2
green	2
sichuan	2
birch	2
canna	2
bougainvillea	2
hypothetical	1
protease	1
black	1
unknown	1
and	1
necrosis	1
fatsia	1
mulberry	1
sinensis	1
tree	1
agave	1
chestnut	1
peru	1
piper	1
codonopsis	1
gooseberry	1
spiraea	1
leafspot	1
subsp	1
andraeanum	1
badna	1
bamboo	1
pitaya	1
paper	1
rnaseh	1
enset	1
znf	1
cycad	1
gulupa	1
chinaberry	1
p3b	1
lucky	1
cayenensis	1
rotundata	1
pandanus	1
epiphyllum	1
SEQUENCES:
acc|GENBANK|QUA12657.1|NEIGHBOR|MW522617|polyprotein [Fig badnavirus 1]
acc|GENBANK|ACE76858.1|NEIGHBOR|EU708316|polyprotein [Citrus yellow mosaic virus]
acc|GENBANK|ACE76864.1|NEIGHBOR|EU708317|polyprotein [Citrus yellow mosaic virus]
acc|GENBANK|ASV59777.1|NEIGHBOR|MF074075|polyprotein [Canna yellow mottle virus]
acc|GENBANK|QBB19900.1|NEIGHBOR|MH319693|polyprotein [Grapevine vein clearing virus]
acc|GENBANK|AXP07690.1|GENBANK|MF991909|ORF3 protein [Enset leaf streak virus]
acc|GENBANK|AWD78011.1|GENBANK|MF991952|ZnF [Grapevine Roditis leaf discoloration-associated virus]
acc|GENBANK|AXG50782.1|NEIGHBOR|MF996373|ORF3 [Piper yellow mottle virus]
acc|GENBANK|AYR16588.1|NEIGHBOR|MG833013|ORF3 [Taro bacilliform virus]
acc|GENBANK|AYR16591.1|NEIGHBOR|MG833014|ORF3 [Taro bacilliform CH virus]
acc|REFSEQ|YP_002117531.1|REFSEQ|NC_011097|ORF3 [Cycad leaf necrosis virus]
acc|GENBANK|ULR16446.1|NEIGHBOR|OL803889|ORFIII [Banana streak CA virus]
acc|GENBANK|WGH47412.1|GENBANK|OP351634|polyprotein [Theobroma cacao]
acc|GENBANK|WGH47416.1|GENBANK|OP351635|polyprotein [Theobroma cacao]
acc|GENBANK|WGH47421.1|GENBANK|OP351636|polyprotein [Theobroma cacao]
acc|GENBANK|USH10133.1|GENBANK|MW655829|ORF3 [Gulupa bacilliform virus A]
acc|GENBANK|QDR47991.1|NEIGHBOR|MK348055|polyprotein [Fig badnavirus 1]
acc|GENBANK|CAE76628.1|NEIGHBOR|AJ608931|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|CAE81279.1|NEIGHBOR|AJ609019|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|CAE81285.1|NEIGHBOR|AJ609020|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|CAG70342.1|GENBANK|AJ781003|CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot Togo A virus]
acc|GENBANK|AFH88826.1|GENBANK|JQ409539|ORFIII [Banana streak OL virus]
acc|GENBANK|QIM56922.1|NEIGHBOR|MN179342|ORF3 polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QIM56926.1|GENBANK|MN179343|ORF3 polyprotein [Cacao swollen shoot Togo B virus]
acc|GENBANK|QIM56931.1|GENBANK|MN179344|ORF3 polyprotein [Cacao swollen shoot Togo B virus]
acc|GENBANK|QIE05265.1|GENBANK|MN187554|polyprotein [Banana streak Peru virus]
acc|GENBANK|UID85531.1|GENBANK|OL630968|ORF3 [Chinaberry tree badnavirus 1]
acc|GENBANK|WIA47479.1|GENBANK|OQ095368|P3b, polyprotein [Andraeanum bacilliform virus]
acc|GENBANK|WIF19181.1|GENBANK|OQ102041|polyprotein [Banana streak OL virus]
acc|GENBANK|WIF19196.1|GENBANK|OQ102045|polyprotein [Taro bacilliform virus]
acc|GENBANK|QCT85336.1|NEIGHBOR|MK816926|polyprotein [Bougainvillea chlorotic vein banding virus]
acc|GENBANK|UVW45091.1|GENBANK|OK666525|polyprotein [Rubus yellow net virus]
acc|GENBANK|UYM51554.1|GENBANK|OP087314|polyprotein [Grapevine badna FI virus]
acc|GENBANK|ASA40116.1|NEIGHBOR|KY827393|ORF3 [Dioscorea bacilliform RT virus 2]
acc|GENBANK|ASA40120.1|NEIGHBOR|KY827394|ORF3 [Dioscorea bacilliform ES virus]
acc|GENBANK|ASA40123.1|NEIGHBOR|KY827395|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|QCA48073.1|GENBANK|MH785297|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48077.1|GENBANK|MH785298|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48081.1|GENBANK|MH785299|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48085.1|GENBANK|MH785300|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48093.1|GENBANK|MH785302|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|QCA48097.1|GENBANK|MH785303|polyprotein [Cacao red vein-banding virus]
acc|GENBANK|AMN88380.1|NEIGHBOR|KT965859|polyprotein [Grapevine Roditis leaf discoloration-associated virus]
acc|GENBANK|AHM92951.1|NEIGHBOR|KJ013507|polyprotein [Banana streak GF virus]
acc|GENBANK|AHM92954.1|NEIGHBOR|KJ013508|polyprotein [Banana streak IM virus]
acc|GENBANK|AHM92957.1|NEIGHBOR|KJ013509|polyprotein [Banana streak MY virus]
acc|GENBANK|AHM92960.1|NEIGHBOR|KJ013510|polyprotein [Banana streak VN virus]
acc|GENBANK|AHM92963.1|NEIGHBOR|KJ013511|polyprotein [Banana streak CA virus]
acc|GENBANK|AVA17857.1|NEIGHBOR|MG686420|polyprotein [Birch leaf roll-associated virus]
acc|GENBANK|AVA17861.1|NEIGHBOR|MG686421|polyprotein [Birch leaf roll-associated virus]
acc|GENBANK|AYD60109.1|NEIGHBOR|MG711311|ORF3 protein [Dioscorea bacilliform RT virus]
acc|GENBANK|AFO11486.1|GENBANK|JN377533|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AFO11489.1|GENBANK|JN377534|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AFO11492.1|GENBANK|JN377535|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AFO11495.1|GENBANK|JN377536|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AFO11498.1|GENBANK|JN377537|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|QBX57843.1|GENBANK|MK632870|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|ANV20878.1|NEIGHBOR|KX008571|ORF3 protein [Dioscorea bacilliform AL virus]
acc|GENBANK|ANV20890.1|NEIGHBOR|KX008575|ORF3 protein [Dioscorea bacilliform RT virus]
acc|GENBANK|ANV20902.1|NEIGHBOR|KX008579|ORF3 protein [Dioscorea bacilliform RT virus]
acc|GENBANK|ATZ69445.1|GENBANK|MF642716|ORF3 polyprotein [Cacao swollen shoot Togo A virus]
acc|GENBANK|ATZ69449.1|NEIGHBOR|MF642717|ORF3 polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ATZ69454.1|NEIGHBOR|MF642718|ORF3 polyprotein [Cacao swollen shoot CD virus]
acc|GENBANK|ATZ69459.1|NEIGHBOR|MF642719|ORF3 polyprotein [Cacao swollen shoot CE virus]
acc|GENBANK|ATZ69490.1|NEIGHBOR|MF642726|ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
acc|GENBANK|ATZ69494.1|NEIGHBOR|MF642727|ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
acc|GENBANK|ATZ69502.1|NEIGHBOR|MF642729|ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
acc|GENBANK|ATZ69506.1|NEIGHBOR|MF642730|ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
acc|GENBANK|ATZ69510.1|NEIGHBOR|MF642731|ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
acc|GENBANK|QRN45547.1|GENBANK|MW052244|P3 [Paper mulberry vein-banding virus]
acc|GENBANK|UMM45048.1|NEIGHBOR|MW052380|ORFIII polyprotein [Banana streak IM virus]
acc|GENBANK|QUQ60708.1|NEIGHBOR|MW052520|polyprotein [Cacao mild mosaic virus]
acc|GENBANK|QUQ60712.1|NEIGHBOR|MW052521|polyprotein [Cacao mild mosaic virus]
acc|GENBANK|QUQ60716.1|NEIGHBOR|MW052522|polyprotein [Cacao mild mosaic virus]
acc|GENBANK|ABR01170.1|NEIGHBOR|EF494181|hypothetical protein [Lucky bamboo bacilliform virus]
acc|GENBANK|UNA88849.1|GENBANK|OL739567|P3 [Jujube associated badnavirus]
acc|GENBANK|UNA88853.1|NEIGHBOR|OL739568|polyprotein [Jujube mosaic-associated virus]
acc|GENBANK|QAX91646.1|GENBANK|MK044821|ORF3 [Codonopsis vein clearing virus]
acc|GENBANK|AKA45798.1|NEIGHBOR|KP710177|polyprotein [Taro bacilliform CH virus]
acc|GENBANK|AJW68048.1|GENBANK|KM214357|ORF3 [Sugarcane bacilliform virus]
acc|GENBANK|AJW68051.1|GENBANK|KM214358|ORF3 [Sugarcane bacilliform virus]
acc|GENBANK|QED42786.1|GENBANK|MH898467|ORF3 [Agave badnavirus A]
acc|GENBANK|QED42803.1|GENBANK|MH898490|ORF3 [Dioscorea badnavirus A]
acc|GENBANK|ARQ88056.1|NEIGHBOR|KY359389|polyprotein [Taro bacilliform CH virus]
acc|GENBANK|WCR39424.1|GENBANK|OP860302|ORF3 [Pineapple bacilliform CO virus]
acc|GENBANK|WCR39427.1|GENBANK|OP860303|ORF3 [Pineapple bacilliform CO virus]
acc|GENBANK|WCR39430.1|GENBANK|OP860304|ORF3 [Pineapple bacilliform ER virus]
acc|GENBANK|ATW01249.1|NEIGHBOR|MF476845|ORF3 protein [Dioscorea bacilliform RT virus 3]
acc|GENBANK|AHJ80147.1|NEIGHBOR|KF724855|P3 polyprotein [Banana streak MY virus]
acc|GENBANK|QOS14488.1|GENBANK|MT261366|polyprotein [Chestnut mosaic virus]
acc|GENBANK|QNH81994.1|GENBANK|MN274946|P3 [Jujube associated badnavirus]
acc|GENBANK|CAD59232.1|NEIGHBOR|AJ534983|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|AER00538.1|NEIGHBOR|JN006805|ORF III [Citrus yellow mosaic virus]
acc|GENBANK|AER00544.1|NEIGHBOR|JN006806|ORF III [Citrus yellow mosaic virus]
acc|GENBANK|UCJ00521.1|NEIGHBOR|MZ220958|polyprotein [Gooseberry vein banding associated virus]
acc|GENBANK|QOJ56170.1|NEIGHBOR|MN245240|polyprotein [Rubus yellow net virus]
acc|GENBANK|AHG94942.1|GENBANK|KF829952|ORF3 [Dioscorea bacilliform virus]
acc|GENBANK|AHG32725.1|GENBANK|KF830000|ORF3 [Dioscorea cayenensis subsp. rotundata]
acc|GENBANK|QZW25209.1|NEIGHBOR|MW892537|polyprotein [Jujube mosaic-associated virus]
acc|GENBANK|QJC63475.1|NEIGHBOR|MN433933|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63479.1|NEIGHBOR|MN433934|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63483.1|NEIGHBOR|MN433935|polyprotein [Cacao swollen shoot CD virus]
acc|GENBANK|QJC63488.1|NEIGHBOR|MN433936|polyprotein [Cacao swollen shoot CD virus]
acc|GENBANK|QJC63493.1|NEIGHBOR|MN433937|polyprotein [Cacao swollen shoot CD virus]
acc|GENBANK|QJC63498.1|NEIGHBOR|MN433938|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63503.1|NEIGHBOR|MN433939|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63520.1|NEIGHBOR|MN433942|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63526.1|NEIGHBOR|MN433943|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63571.1|NEIGHBOR|MN433952|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63581.1|NEIGHBOR|MN433954|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|QJC63621.1|NEIGHBOR|MN433962|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|AYH52115.1|NEIGHBOR|MG948562|ORF 3 [Dioscorea bacilliform AL virus]
acc|GENBANK|AIY62341.1|NEIGHBOR|KJ725346|polyprotein [Grapevine vein clearing virus]
acc|GENBANK|ACH86211.1|NEIGHBOR|EU884191|unknown [Citrus yellow mosaic virus]
acc|GENBANK|QOJ37922.1|GENBANK|MN716781|polyprotein [Grapevine vein clearing virus]
acc|GENBANK|WDR24967.1|GENBANK|ON773439|polyprotein [Camellia sinensis badnavirus]
acc|GENBANK|UVW45035.1|GENBANK|OK624603|ORF3 [Pandanus badnavirus]
acc|GENBANK|UYC36391.1|GENBANK|MZ702870|polyprotein [Black pepper virus B]
acc|GENBANK|QYB23644.2|NEIGHBOR|MZ358192|polyprotein [Rubus yellow net virus]
acc|GENBANK|AVT44083.1|NEIGHBOR|KY971493|polyprotein [Canna yellow mottle virus]
acc|GENBANK|ACB87156.1|NEIGHBOR|EU489745|polyprotein [Citrus yellow mosaic virus]
acc|GENBANK|AOV63232.1|GENBANK|KT186240|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|QBB63967.1|GENBANK|MK371353|polyprotein [Green Sichuan pepper vein clearing-associated virus]
acc|GENBANK|QBB63970.1|GENBANK|MK371354|polyprotein [Green Sichuan pepper vein clearing-associated virus]
acc|GENBANK|WEX32080.1|GENBANK|ON402786|polyprotein [Dioscorea bacilliform SN virus]
acc|GENBANK|WEX32083.1|GENBANK|ON402787|polyprotein [Dioscorea bacilliform SN virus]
acc|GENBANK|WEX32086.1|GENBANK|ON402788|polyprotein [Dioscorea bacilliform AL virus]
acc|GENBANK|QVX19931.1|NEIGHBOR|MW080369|ORF3 polyprotein [Spiraea yellow leafspot virus]
acc|GENBANK|UNA06888.1|NEIGHBOR|MW090056|ORF III polyprotein [Banana streak MY virus]
acc|GENBANK|AHB61260.1|GENBANK|KF241951|polyprotein [Rubus yellow net virus]
acc|GENBANK|WAK97196.1|GENBANK|OM540428|polyprotein [Fatsia badnavirus 1]
acc|GENBANK|AVM13465.1|NEIGHBOR|MG017318|polyprotein [Taro bacilliform virus]
acc|GENBANK|AWK49026.1|NEIGHBOR|MG017323|ORF3 [Taro bacilliform virus]
acc|GENBANK|AWK49030.1|NEIGHBOR|MG017324|ORF3 [Taro bacilliform CH virus]
acc|GENBANK|AWK49034.1|NEIGHBOR|MG017325|ORF3 [Taro bacilliform CH virus]
acc|GENBANK|AWK49038.1|NEIGHBOR|MG017326|ORF3 [Taro bacilliform CH virus]
acc|GENBANK|AWK49042.1|NEIGHBOR|MG017327|ORF3 [Taro bacilliform CH virus]
acc|GENBANK|ASG91836.1|NEIGHBOR|KX592571|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91840.1|NEIGHBOR|KX592572|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91844.1|NEIGHBOR|KX592573|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91848.1|NEIGHBOR|KX592574|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91859.1|NEIGHBOR|KX592576|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91891.1|NEIGHBOR|KX592582|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|ASG91901.1|NEIGHBOR|KX592584|polyprotein [Cacao swollen shoot virus]
acc|GENBANK|AMW92451.1|NEIGHBOR|KT895259|polyprotein [Banana streak virus]
acc|GENBANK|QVG60622.1|GENBANK|MT120304|ORFIII polyprotein [Banana streak MY virus]
acc|GENBANK|QHG11155.1|GENBANK|MK991812|polyprotein [Pitaya badnavirus 1]
acc|GENBANK|UUL70697.1|GENBANK|ON086738|polyprotein [Taro bacilliform CH virus]
acc|GENBANK|ABI47986.1|NEIGHBOR|DQ822074|ORF3 protein [Dioscorea bacilliform virus]
acc|GENBANK|ACZ02411.1|GENBANK|FJ824814|polyprotein [Sugarcane bacilliform virus]
acc|GENBANK|AEV42076.1|NEIGHBOR|GQ398110|putative polyprotein [Pineapple bacilliform CO virus]
acc|GENBANK|QBB68760.1|GENBANK|MH396440|polyprotein [Epiphyllum badnavirus 1]
acc|GENBANK|AYH52610.1|GENBANK|MH404155|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52613.1|GENBANK|MH404156|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52616.1|GENBANK|MH404157|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52619.1|GENBANK|MH404158|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52622.1|GENBANK|MH404159|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52628.1|GENBANK|MH404161|ORF3 [Dioscorea bacilliform AL virus 2]
acc|GENBANK|AYH52640.1|NEIGHBOR|MH404165|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|AYH52643.1|NEIGHBOR|MH404166|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|AYH52646.1|NEIGHBOR|MH404167|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|AYH52655.1|NEIGHBOR|MH404170|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|AYH52664.1|NEIGHBOR|MH404173|ORF3 [Dioscorea bacilliform AL virus]
acc|GENBANK|QUN00614.1|NEIGHBOR|MT783680|polyprotein [Grapevine Roditis leaf discoloration-associated virus]
acc|GENBANK|QID59005.1|GENBANK|MT036049|putative polyprotein [Camellia-associated badnavirus]
acc|GENBANK|QEG78874.1|NEIGHBOR|MK473389|polyprotein [Bougainvillea chlorotic vein banding virus]
