LENGTH	1192
LCA	Viruses::Riboviria::Pararnavirae::Artverviricota::Revtraviricetes::Ortervirales::Retroviridae::Orthoretrovirinae
NBSEQ	134
KEYWORDS:
domain	435
rnase	306
reverse	306
transcriptase	306
like	256
integrase	232
found	203
zinc	199
finger	148
dna	146
core	137
protease	118
aspartyl	118
virus	102
murine	102
terminal	102
leukemia	102
mlv	102
h2c2	100
rna	98
dependent	98
polymerase	98
protein	82
retroviral	77
gag	75
binding	74
probable	48
polyprotein	44
p30	33
shell	33
matrix	30
p15	30
knuckle	25
putative	23
coat	20
inner	19
p12	19
env	1
KEYWORDS FROM SEQUENCES:
pol	101
virus	61
protein	50
polyprotein	50
leukemia	36
gag	34
retrovirus	30
murine	23
endogenous	21
porcine	16
pro	15
precursor	13
mus	13
polymerase	11
musculus	11
gammaretrovirus	10
putative	9
feline	9
mulv	9
reticuloendotheliosis	9
reverse	8
transcriptase	8
xenotropic	8
truncated	7
bat	6
related	6
integrase	6
sus	6
scrofa	6
felis	5
odocoileus	5
hemionus	5
catus	4
recombinant	4
gibbon	3
ape	3
koala	3
ralv	3
monkey	2
erv	2
endonuclease	2
homo	2
sapiens	2
fusion	2
sarcoma	2
woolly	2
castaneus	2
walleye	2
epidermal	2
hyperplasia	2
rd114	2
prexmrv	2
like	1
hypothetical	1
associated	1
rat	1
baboon	1
envelope	1
multiple	1
rhinolophus	1
necrosis	1
spleen	1
strain	1
cell	1
end	1
herv	1
mouse	1
hipposideros	1
mink	1
flying	1
fox	1
ferrumequinum	1
syncytial	1
enhydra	1
lutris	1
rhinella	1
marina	1
391	1
forming	1
megaderma	1
409	1
silvestris	1
xmrv	1
merv	1
cervicolor	1
popaeus	1
vp62	1
rauscher	1
476	1
galidia	1
echidna	1
chick	1
hervey	1
pteropid	1
larvatus	1
friend	1
focus	1
nereis	1
lyra	1
caroli	1
pr180	1
moloney	1
sclerosis	1
dunni	1
SEQUENCES:
acc|GENBANK|ADU55769.1|GENBANK|HQ385294|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|ADU55770.1|GENBANK|HQ385295|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|ADU55772.1|GENBANK|HQ385300|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|AEF12607.1|GENBANK|HQ540592|pol protein [Porcine endogenous retrovirus A]
acc|GENBANK|AEF12610.1|GENBANK|HQ540593|pol protein [Porcine endogenous retrovirus B]
acc|GENBANK|AEF12615.1|GENBANK|HQ540595|pol protein [Porcine endogenous retrovirus B]
acc|GENBANK|ASH96780.1|GENBANK|MF185397|polymerase [Reticuloendotheliosis virus]
acc|GENBANK|ALV83300.1|NEIGHBOR|KT724047|pol polyprotein [Gibbon ape leukemia virus]
acc|GENBANK|ALV83306.1|NEIGHBOR|KT724049|pol polyprotein [Gibbon ape leukemia virus]
acc|GENBANK|AAB06450.1|GENBANK|U63133|Gag-Pol polyprotein [Mus musculus]
acc|GENBANK|CAA36849.1|GENBANK|X52622|integrase (409 AA) [Mus musculus]
acc|GENBANK|CAB38566.1|GENBANK|X51929|polyprotein [Felis silvestris]
acc|GENBANK|AEA72809.1|NEIGHBOR|JF714652|putative gag-pol polyprotein [XMRV-like mouse endogenous retrovirus mERV-XL]
acc|GENBANK|AAK16155.1|GENBANK|AF327437|pol polyprotein [Mus cervicolor popaeus endogenous virus]
acc|GENBANK|WXX18640.1|GENBANK|PP526163|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|WXX18643.1|GENBANK|PP526164|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|WXX18646.1|GENBANK|PP526165|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|AAP29639.1|GENBANK|AF499232|pol protein [Homo sapiens]
acc|GENBANK|WHP37833.1|GENBANK|OP921768|pol protein [Gammaretrovirus sp.]
acc|GENBANK|BCO16366.1|GENBANK|LC597234|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|QAS62334.1|GENBANK|MH198419|truncated pol protein [Sus scrofa]
acc|GENBANK|QOS45062.1|GENBANK|MT984603|Pro-Pol [Sus scrofa]
acc|GENBANK|ABD49687.1|NEIGHBOR|DQ399707|putative gag-pro-pol polyprotein [Xenotropic MuLV-related virus VP62]
acc|GENBANK|AKQ19156.1|NEIGHBOR|KP728112|gag-pro-pol precursor polyprotein [Feline leukemia virus]
acc|GENBANK|ADG27337.1|GENBANK|GU980187|truncated pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AYE20483.1|NEIGHBOR|MF631845|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|AYG96584.1|NEIGHBOR|MF681667|gag-pro-pol polyprotein [Feline leukemia virus]
acc|GENBANK|AYG96594.1|NEIGHBOR|MF681672|gag-pro-pol polyprotein [Feline leukemia virus]
acc|GENBANK|AAC58562.1|GENBANK|U87552|integrase [Murine leukemia virus]
acc|GENBANK|AAB86912.1|NEIGHBOR|U94692|Pol [Rauscher murine leukemia virus]
acc|GENBANK|CAA25685.1|GENBANK|X01455|C end of pol protein (reverse transcriptase) [Reticuloendotheliosis virus]
acc|GENBANK|CAA28802.1|GENBANK|X05165|endonuclease (391 AA) [Murine leukemia virus]
acc|GENBANK|CAA31582.1|GENBANK|X13194|pol endonuclease [Gibbon ape leukemia virus]
acc|GENBANK|CAA33367.1|GENBANK|X15311|reverse transcriptase (476 AA) [Woolly monkey sarcoma virus]
acc|GENBANK|CAA55543.1|GENBANK|X78945|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|CAA76582.1|GENBANK|Y17013|pol [Porcine endogenous retrovirus]
acc|GENBANK|AAR12481.1|GENBANK|AY349136|truncated gag-pol fusion protein [Murine leukemia virus]
acc|GENBANK|AAV68488.2|NEIGHBOR|AY818896|gag-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AMK06435.1|GENBANK|KU324808|pol [Mus musculus musculus]
acc|GENBANK|WCB86803.1|GENBANK|MZ964580|gag-pro-pol precursor [Feline leukemia virus]
acc|GENBANK|AAN46639.1|GENBANK|AY140896|truncated pol/envelope fusion protein [Mus musculus]
acc|GENBANK|AAO37227.1|GENBANK|AY219536|integrase [Mus musculus]
acc|GENBANK|AAO37253.1|GENBANK|AY219549|truncated integrase [Mus musculus]
acc|GENBANK|AAY27069.1|GENBANK|AY999005|truncated polyprotein [Mus musculus castaneus]
acc|GENBANK|QDH76136.1|GENBANK|MK948412|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AGV92853.1|GENBANK|KF313135|polymerase [Galidia ERV]
acc|GENBANK|AGV92856.1|GENBANK|KF313136|polymerase [Echidna ERV]
acc|GENBANK|ABC26827.1|GENBANK|DQ237902|polymerase [Spleen necrosis virus]
acc|GENBANK|ABC26829.1|GENBANK|DQ237906|polymerase [Reticuloendotheliosis virus]
acc|GENBANK|ABC26830.1|GENBANK|DQ237908|polymerase [Reticuloendotheliosis virus]
acc|GENBANK|BAD52413.1|NEIGHBOR|AB187565|POL polyprotein precursor [Murine leukemia virus]
acc|GENBANK|AAT77167.1|NEIGHBOR|AY570980|pol protein [Porcine endogenous retrovirus C/A]
acc|GENBANK|AAM29192.1|GENBANK|AY099323|gag-pol polyprotein [Porcine endogenous retrovirus A]
acc|GENBANK|AAM29194.1|GENBANK|AY099324|gag-pol polyprotein [Porcine endogenous retrovirus B]
acc|GENBANK|ABS85542.1|GENBANK|EU035300|putative gag-pro-pol polyprotein [Xenotropic murine leukemia virus]
acc|REFSEQ|YP_009513211.1|REFSEQ|NC_039228|pol protein [Koala retrovirus]
acc|REFSEQ|YP_009665179.1|REFSEQ|NC_043194|pol polyprotein [Walleye epidermal hyperplasia virus 1]
acc|REFSEQ|YP_009665180.1|REFSEQ|NC_043195|pol polyprotein [Walleye epidermal hyperplasia virus 2]
acc|REFSEQ|YP_009665181.1|REFSEQ|NC_043196|polymerase [Chick syncytial virus]
acc|GENBANK|BAJ16549.1|NEIGHBOR|AB559882|Gag-Pol precursor polyprotein [RD114 retrovirus]
acc|GENBANK|QJT93247.1|GENBANK|MN413610|pol protein [Hervey pteropid gammaretrovirus]
acc|GENBANK|QJT93256.1|GENBANK|MN413613|pol protein [Hipposideros larvatus gammaretrovirus]
acc|GENBANK|AGU99874.1|GENBANK|KF584029|gag-pro-pol polyprotein [PreXMRV-1/PreXMRV-2 recombinant]
acc|GENBANK|AAC78249.1|GENBANK|M77194|polymerase [Rat leukemia virus]
acc|GENBANK|AAA79247.1|NEIGHBOR|M87550|putative reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAA46525.1|GENBANK|M93052|pol [Murine leukemia virus]
acc|GENBANK|AAC52075.1|GENBANK|AF026246|HERV-E integrase [Homo sapiens]
acc|GENBANK|UWV21323.1|GENBANK|MW839565|pol protein [Feline leukemia virus]
acc|GENBANK|WOC30343.1|GENBANK|OR565860|gag-pol polyprotein [Porcine endogenous retrovirus B]
acc|GENBANK|WXX19368.1|GENBANK|OR572101|pol protein [Rhinolophus ferrumequinum retrovirus]
acc|GENBANK|WOL52681.1|GENBANK|OR574834|pol protein [Porcine endogenous retrovirus C]
acc|GENBANK|AAA18407.1|GENBANK|AH000833|pol protein [Mus musculus]
acc|GENBANK|AHY24815.1|NEIGHBOR|KF786285|pol protein [Koala retrovirus]
acc|GENBANK|QDA02050.1|GENBANK|MK040728|pol protein [Flying-fox retrovirus]
acc|GENBANK|AMK06423.1|NEIGHBOR|KU324804|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|ABU54793.1|GENBANK|EU075329|gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AAA92679.1|NEIGHBOR|U13766|gag-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AYG96643.1|GENBANK|MG020273|gag-pro-pol protein [Feline leukemia virus]
acc|GENBANK|AAY28928.1|NEIGHBOR|AY953542|pol protein [Porcine endogenous retrovirus C/A]
acc|REFSEQ|YP_009109689.1|REFSEQ|NC_022517|gag-pol precursor polyprotein [Baboon endogenous virus strain M7]
acc|REFSEQ|YP_001497148.1|REFSEQ|NC_009889|gag-pol precursor polyprotein [RD114 retrovirus]
acc|REFSEQ|YP_001165470.1|REFSEQ|NC_009424|hypothetical protein [Woolly monkey sarcoma virus]
acc|GENBANK|UUG66872.1|GENBANK|OP081083|pol protein [Gammaretrovirus sp.]
acc|GENBANK|AGO86849.1|NEIGHBOR|KC779547|gag-pol polyprotein [Koala retrovirus]
acc|GENBANK|AAD30536.1|GENBANK|AF133256|reverse transcriptase [Friend mink cell focus-forming virus]
acc|GENBANK|AAD34536.1|GENBANK|AF136491|polymerase [Murine leukemia virus]
acc|GENBANK|CCA30551.1|GENBANK|FR837946|gag-pro-pol polyprotein [Xenotropic MuLV-related virus]
acc|GENBANK|WRK24264.1|GENBANK|PP028550|putative gag-pro-pol polyprotein [Xenotropic murine leukemia virus]
acc|GENBANK|AEW89632.1|GENBANK|JN592050|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49861.1|GENBANK|KC934943|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49862.1|GENBANK|KC934944|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49864.1|GENBANK|KC934946|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AKA58521.1|GENBANK|KP261824|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AOT85955.1|GENBANK|KX018258|gag-pol precursor polyprotein [Enhydra lutris nereis]
acc|GENBANK|BAQ55420.1|GENBANK|LC005749|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|AFM52260.1|GENBANK|JQ951956|Pol [Megaderma lyra retrovirus]
acc|GENBANK|AAG10201.1|GENBANK|AF290913|polyprotein [Murine leukemia virus]
acc|GENBANK|AAA39757.1|GENBANK|M19005|pol protein [Mus musculus]
acc|GENBANK|AGP25480.1|GENBANK|KC460271|pol protein [Mus caroli]
acc|GENBANK|AAO46143.1|GENBANK|AY236757|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|AAO46146.1|GENBANK|AY236759|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|AAO46150.1|GENBANK|AY236761|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|ACY30461.1|GENBANK|GQ497345|putative gag polyprotein [Xenotropic MuLV-related virus]
acc|GENBANK|AWS20967.1|GENBANK|MG981046|pol protein [Rhinella marina endogenous retrovirus]
acc|GENBANK|AAL69910.1|NEIGHBOR|AF462057|Pr180 Gag-Pro-Pol polyprotein [Moloney murine leukemia virus]
acc|GENBANK|AAA46527.1|GENBANK|M10100|pol protein [Murine leukemia virus]
acc|GENBANK|AGN73375.1|GENBANK|KF170221|pol protein [Bat gammaretrovirus]
acc|GENBANK|AMZ03629.1|GENBANK|KU981174|pol [Reticuloendotheliosis virus]
acc|GENBANK|ARB03462.1|NEIGHBOR|KY574504|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|CAC82505.2|GENBANK|AJ279057|Pol protein [Porcine endogenous retrovirus]
acc|GENBANK|CAC39626.1|GENBANK|AJ293657|polymerase [Porcine endogenous retrovirus C]
acc|GENBANK|AAB58752.1|GENBANK|AF003736|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAB66528.1|GENBANK|AF009668|polyprotein [Multiple sclerosis associated retrovirus]
acc|GENBANK|BAB47169.1|GENBANK|AB050721|polymerase [Mus musculus castaneus]
acc|GENBANK|AAC31805.1|NEIGHBOR|AF053745|pol polyprotein [Mus dunni endogenous virus]
acc|GENBANK|AAK50381.1|GENBANK|U43202|pol precursor protein [Murine leukemia virus]
acc|GENBANK|AAC55819.1|GENBANK|U51729|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAC55820.1|GENBANK|U51730|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|QQH14880.1|GENBANK|MT648453|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14882.1|GENBANK|MT648455|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14884.1|GENBANK|MT648457|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14885.1|GENBANK|MT648458|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14887.1|GENBANK|MT648460|pol protein [Bat gammaretrovirus]
acc|GENBANK|BAM33593.1|GENBANK|AB674441|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BAM33596.1|GENBANK|AB674444|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|CAJ76246.1|GENBANK|AM229311|polyprotein [Sus scrofa]
acc|GENBANK|CAJ76250.1|GENBANK|AM229313|polyprotein [Sus scrofa]
acc|GENBANK|CAJ76251.1|GENBANK|AM229313|truncated POL protein [Sus scrofa]
acc|GENBANK|ACF20333.1|GENBANK|EU789636|putative gag-pol polyprotein [Sus scrofa]
acc|GENBANK|BBI55082.1|NEIGHBOR|LC462187|gag-pol precursor polyprotein [Feline leukemia virus]
acc|GENBANK|BAK41647.1|GENBANK|AB635620|integrase [Feline leukemia virus]
acc|GENBANK|BAM45657.1|GENBANK|AB672612|pol polyprotein [Feline leukemia virus]
acc|GENBANK|AAL87853.1|GENBANK|AF435966|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AAL87856.1|GENBANK|AF435967|pol protein [Porcine endogenous retrovirus]
