LENGTH	1186
LCA	Viruses::Riboviria::Pararnavirae::Artverviricota::Revtraviricetes::Ortervirales::Retroviridae::Orthoretrovirinae
NBSEQ	133
KEYWORDS:
domain	431
rnase	303
reverse	303
transcriptase	303
like	254
integrase	230
found	201
zinc	198
finger	147
dna	145
core	136
protease	114
aspartyl	114
virus	101
terminal	101
leukemia	101
murine	101
mlv	101
h2c2	99
rna	97
dependent	97
polymerase	97
protein	82
retroviral	75
binding	74
gag	74
probable	48
polyprotein	43
p30	33
shell	33
matrix	30
p15	30
knuckle	25
putative	22
coat	20
p12	19
inner	19
env	1
KEYWORDS FROM SEQUENCES:
pol	100
virus	63
polyprotein	51
protein	49
leukemia	38
gag	33
retrovirus	29
murine	24
endogenous	21
porcine	16
pro	16
precursor	13
mus	12
polymerase	11
musculus	10
feline	9
reticuloendotheliosis	9
mulv	9
putative	8
reverse	8
transcriptase	8
xenotropic	8
gammaretrovirus	8
truncated	7
bat	6
related	6
integrase	6
sus	6
scrofa	6
felis	6
catus	5
odocoileus	5
hemionus	5
recombinant	4
gibbon	4
ape	4
prexmrv	3
ralv	3
koala	3
fusion	2
monkey	2
endonuclease	2
castaneus	2
friend	2
woolly	2
sarcoma	2
erv	2
walleye	2
epidermal	2
hyperplasia	2
human	1
hypothetical	1
multiple	1
baboon	1
strain	1
mink	1
associated	1
megaderma	1
rhinolophus	1
envelope	1
spleen	1
necrosis	1
polypeptide	1
flying	1
fox	1
cell	1
rat	1
homo	1
sapiens	1
herv	1
rhinella	1
marina	1
ferrumequinum	1
391	1
409	1
sclerosis	1
dunni	1
ecotropic	1
polytropic	1
amphotropic	1
hcml	1
arv	1
end	1
476	1
cervicolor	1
popaeus	1
rd114	1
silvestris	1
caroli	1
galidia	1
echidna	1
chick	1
syncytial	1
enhydra	1
lutris	1
nereis	1
focus	1
forming	1
lyra	1
SEQUENCES:
acc|GENBANK|AND74259.1|GENBANK|KU204702|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|AAA18407.1|GENBANK|AH000833|pol protein [Mus musculus]
acc|GENBANK|AAN46639.1|GENBANK|AY140896|truncated pol/envelope fusion protein [Mus musculus]
acc|GENBANK|AAO37227.1|GENBANK|AY219536|integrase [Mus musculus]
acc|GENBANK|AAO37253.1|GENBANK|AY219549|truncated integrase [Mus musculus]
acc|GENBANK|AAY27069.1|GENBANK|AY999005|truncated polyprotein [Mus musculus castaneus]
acc|GENBANK|AAY28928.1|GENBANK|AY953542|pol protein [Porcine endogenous retrovirus C/A]
acc|GENBANK|QAS62334.1|GENBANK|MH198419|truncated pol protein [Sus scrofa]
acc|GENBANK|QOS45062.1|GENBANK|MT984603|Pro-Pol [Sus scrofa]
acc|GENBANK|AMP18917.1|GENBANK|KU641115|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|AAB58752.1|GENBANK|AF003736|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAB66528.1|GENBANK|AF009668|polyprotein [Multiple sclerosis associated retrovirus]
acc|GENBANK|AAC98548.1|GENBANK|AF019230|pol polypeptide [Murine leukemia virus]
acc|GENBANK|AAC31805.1|GENBANK|AF053745|pol polyprotein [Mus dunni endogenous virus]
acc|GENBANK|ABS85542.1|GENBANK|EU035300|putative gag-pro-pol polyprotein [Xenotropic murine leukemia virus]
acc|GENBANK|CCA30551.1|GENBANK|FR837946|gag-pro-pol polyprotein [Xenotropic MuLV-related virus]
acc|GENBANK|CCB84243.1|GENBANK|FR871850|putative gag-pro-pol polyprotein [PreXMRV-2]
acc|GENBANK|CCB84810.1|GENBANK|FR872816|putative gag-pro-pol polyprotein [Xenotropic MuLV-related virus]
acc|GENBANK|AYG96643.1|GENBANK|MG020273|gag-pro-pol protein [Feline leukemia virus]
acc|GENBANK|AID54958.1|GENBANK|KJ668270|gag-pro-pol polyprotein [Ecotropic murine leukemia virus]
acc|GENBANK|AID54962.1|GENBANK|KJ668271|gag-pro-pol polyprotein [Polytropic murine leukemia virus]
acc|GENBANK|ACD35951.1|GENBANK|EU523109|pol polyprotein [Porcine endogenous retrovirus]
acc|GENBANK|AYG96578.1|GENBANK|MF681664|gag-pro-pol polyprotein [Feline leukemia virus]
acc|GENBANK|AYG96584.1|GENBANK|MF681667|gag-pro-pol polyprotein [Feline leukemia virus]
acc|GENBANK|AYG96594.1|GENBANK|MF681672|gag-pro-pol polyprotein [Feline leukemia virus]
acc|GENBANK|ADU55769.1|GENBANK|HQ385294|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|ADU55770.1|GENBANK|HQ385295|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|ADU55772.1|GENBANK|HQ385300|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|AAO61197.1|GENBANK|AF411814|gag-pro-pol polyprotein [Amphotropic murine leukemia virus]
acc|GENBANK|AAL87853.1|GENBANK|AF435966|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AAL87856.1|GENBANK|AF435967|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AAA46527.1|GENBANK|M10100|pol protein [Murine leukemia virus]
acc|GENBANK|AAC78249.1|GENBANK|M77194|polymerase [Rat leukemia virus]
acc|GENBANK|AAA79247.1|GENBANK|M87550|putative reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAA46525.1|GENBANK|M93052|pol [Murine leukemia virus]
acc|GENBANK|AMK06423.1|GENBANK|KU324804|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|BAA22064.1|GENBANK|D88386|gag-pol polyprotein (precursor protein) [Friend murine leukemia virus]
acc|GENBANK|AAP06677.1|GENBANK|AY208746|pol protein [Human endogenous retrovirus HCML-ARV]
acc|GENBANK|AAO46143.1|GENBANK|AY236757|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|AAO46146.1|GENBANK|AY236759|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|AAO46150.1|GENBANK|AY236761|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|CAA25685.1|GENBANK|X01455|C end of pol protein (reverse transcriptase) [Reticuloendotheliosis virus]
acc|GENBANK|CAA28802.1|GENBANK|X05165|endonuclease (391 AA) [Murine leukemia virus]
acc|GENBANK|CAA31582.1|GENBANK|X13194|pol endonuclease [Gibbon ape leukemia virus]
acc|GENBANK|CAA33367.1|GENBANK|X15311|reverse transcriptase (476 AA) [Woolly monkey sarcoma virus]
acc|GENBANK|CAA55543.1|GENBANK|X78945|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|CAA76582.1|GENBANK|Y17013|pol [Porcine endogenous retrovirus]
acc|GENBANK|AAG10201.1|GENBANK|AF290913|polyprotein [Murine leukemia virus]
acc|GENBANK|AAK16155.1|GENBANK|AF327437|pol polyprotein [Mus cervicolor popaeus endogenous virus]
acc|REFSEQ|YP_009109689.1|REFSEQ|NC_022517|gag-pol precursor polyprotein [Baboon endogenous virus strain M7]
acc|REFSEQ|NP_056790.1|REFSEQ|NC_001885|pol polyprotein [Gibbon ape leukemia virus]
acc|REFSEQ|YP_001497148.1|REFSEQ|NC_009889|gag-pol precursor polyprotein [RD114 retrovirus]
acc|REFSEQ|YP_001165470.1|REFSEQ|NC_009424|hypothetical protein [Woolly monkey sarcoma virus]
acc|GENBANK|CAB38566.1|GENBANK|X51929|polyprotein [Felis silvestris]
acc|GENBANK|AAC55819.1|GENBANK|U51729|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAC55820.1|GENBANK|U51730|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAC80264.1|GENBANK|U60065|pol polyprotein [Gibbon ape leukemia virus]
acc|GENBANK|AAC58562.1|GENBANK|U87552|integrase [Murine leukemia virus]
acc|GENBANK|UWV21323.1|GENBANK|MW839565|pol protein [Feline leukemia virus]
acc|GENBANK|AAV68488.2|GENBANK|AY818896|gag-pol polyprotein [Murine leukemia virus]
acc|GENBANK|WPA94626.1|GENBANK|OR761825|pol protein [Rhinolophus ferrumequinum retrovirus]
acc|GENBANK|WHP37833.1|GENBANK|OP921768|pol protein [Gammaretrovirus sp.]
acc|GENBANK|AGU99874.1|GENBANK|KF584029|gag-pro-pol polyprotein [PreXMRV-1/PreXMRV-2 recombinant]
acc|GENBANK|AWS20967.1|GENBANK|MG981046|pol protein [Rhinella marina endogenous retrovirus]
acc|GENBANK|QQH14880.1|GENBANK|MT648453|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14882.1|GENBANK|MT648455|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14884.1|GENBANK|MT648457|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14885.1|GENBANK|MT648458|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14887.1|GENBANK|MT648460|pol protein [Bat gammaretrovirus]
acc|GENBANK|AAA39757.1|GENBANK|M19005|pol protein [Mus musculus]
acc|GENBANK|ASU50141.1|GENBANK|KY484771|gag-pol polyprotein [Porcine endogenous retrovirus A]
acc|GENBANK|QDA02050.1|GENBANK|MK040728|pol protein [Flying-fox retrovirus]
acc|GENBANK|WOL52681.1|GENBANK|OR574834|pol protein [Porcine endogenous retrovirus C]
acc|GENBANK|CAC82502.1|GENBANK|AJ279056|Pol protein [Porcine endogenous retrovirus]
acc|GENBANK|CAC82505.2|GENBANK|AJ279057|Pol protein [Porcine endogenous retrovirus]
acc|GENBANK|CAC39617.1|GENBANK|AJ293656|polymerase [Porcine endogenous retrovirus C]
acc|GENBANK|CAC39626.1|GENBANK|AJ293657|polymerase [Porcine endogenous retrovirus C]
acc|GENBANK|AHY24800.1|GENBANK|KF786280|pol protein [Koala retrovirus]
acc|GENBANK|AHY24815.1|GENBANK|KF786285|pol protein [Koala retrovirus]
acc|GENBANK|AEF12610.1|GENBANK|HQ540593|pol protein [Porcine endogenous retrovirus B]
acc|GENBANK|AEF12615.1|GENBANK|HQ540595|pol protein [Porcine endogenous retrovirus B]
acc|GENBANK|AGP25480.1|GENBANK|KC460271|pol protein [Mus caroli]
acc|GENBANK|AMK06435.1|GENBANK|KU324808|pol [Mus musculus musculus]
acc|GENBANK|AMZ03629.1|GENBANK|KU981174|pol [Reticuloendotheliosis virus]
acc|GENBANK|AAC52075.1|GENBANK|AF026246|HERV-E integrase [Homo sapiens]
acc|GENBANK|BAM33593.1|GENBANK|AB674441|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BAM33594.1|GENBANK|AB674443|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BAM33596.1|GENBANK|AB674444|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|CAJ76246.1|GENBANK|AM229311|polyprotein [Sus scrofa]
acc|GENBANK|CAJ76250.1|GENBANK|AM229313|polyprotein [Sus scrofa]
acc|GENBANK|CAJ76251.1|GENBANK|AM229313|truncated POL protein [Sus scrofa]
acc|GENBANK|BAL04139.1|GENBANK|AB060732|gag-pol precursor polyprotein [Feline leukemia virus]
acc|GENBANK|AGV92853.1|GENBANK|KF313135|polymerase [Galidia ERV]
acc|GENBANK|AGV92856.1|GENBANK|KF313136|polymerase [Echidna ERV]
acc|REFSEQ|YP_009665179.1|REFSEQ|NC_043194|pol polyprotein [Walleye epidermal hyperplasia virus 1]
acc|REFSEQ|YP_009665180.1|REFSEQ|NC_043195|pol polyprotein [Walleye epidermal hyperplasia virus 2]
acc|REFSEQ|YP_009665181.1|REFSEQ|NC_043196|polymerase [Chick syncytial virus]
acc|GENBANK|AEW89632.1|GENBANK|JN592050|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49861.1|GENBANK|KC934943|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49862.1|GENBANK|KC934944|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49864.1|GENBANK|KC934946|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AKA58521.1|GENBANK|KP261824|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AOT85955.1|GENBANK|KX018258|gag-pol precursor polyprotein [Enhydra lutris nereis]
acc|GENBANK|BAQ55417.1|GENBANK|LC005746|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BAQ55420.1|GENBANK|LC005749|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|QDH76136.1|GENBANK|MK948412|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AGO86849.1|GENBANK|KC779547|gag-pol polyprotein [Koala retrovirus]
acc|GENBANK|BAK41647.1|GENBANK|AB635620|integrase [Feline leukemia virus]
acc|GENBANK|BAB47169.1|GENBANK|AB050721|polymerase [Mus musculus castaneus]
acc|GENBANK|ABC26827.1|GENBANK|DQ237902|polymerase [Spleen necrosis virus]
acc|GENBANK|ABC26829.1|GENBANK|DQ237906|polymerase [Reticuloendotheliosis virus]
acc|GENBANK|ABC26830.1|GENBANK|DQ237908|polymerase [Reticuloendotheliosis virus]
acc|GENBANK|CAA36849.1|GENBANK|X52622|integrase (409 AA) [Mus musculus]
acc|GENBANK|BAM45657.1|GENBANK|AB672612|pol polyprotein [Feline leukemia virus]
acc|GENBANK|ACY30461.1|GENBANK|GQ497345|putative gag polyprotein [Xenotropic MuLV-related virus]
acc|GENBANK|AAM29194.1|GENBANK|AY099324|gag-pol polyprotein [Porcine endogenous retrovirus B]
acc|GENBANK|AAR12481.1|GENBANK|AY349136|truncated gag-pol fusion protein [Murine leukemia virus]
acc|GENBANK|AGN73375.1|GENBANK|KF170221|pol protein [Bat gammaretrovirus]
acc|GENBANK|WCB86803.1|GENBANK|MZ964580|gag-pro-pol precursor [Feline leukemia virus]
acc|GENBANK|WRK24264.1|GENBANK|PP028550|putative gag-pro-pol polyprotein [Xenotropic murine leukemia virus]
acc|GENBANK|ALV83306.1|GENBANK|KT724049|pol polyprotein [Gibbon ape leukemia virus]
acc|GENBANK|AAD30536.1|GENBANK|AF133256|reverse transcriptase [Friend mink cell focus-forming virus]
acc|GENBANK|AAD34536.1|GENBANK|AF136491|polymerase [Murine leukemia virus]
acc|GENBANK|UUG66872.1|GENBANK|OP081083|pol protein [Gammaretrovirus sp.]
acc|GENBANK|ACF20333.1|GENBANK|EU789636|putative gag-pol polyprotein [Sus scrofa]
acc|GENBANK|AAA92679.1|GENBANK|U13766|gag-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AAK50381.1|GENBANK|U43202|pol precursor protein [Murine leukemia virus]
acc|GENBANK|ADG27337.1|GENBANK|GU980187|truncated pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AFM52260.1|GENBANK|JQ951956|Pol [Megaderma lyra retrovirus]
acc|GENBANK|WXX18640.1|GENBANK|PP526163|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|WXX18643.1|GENBANK|PP526164|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|WXX18646.1|GENBANK|PP526165|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|BAD52413.1|GENBANK|AB187565|POL polyprotein precursor [Murine leukemia virus]
