LENGTH	1318
LCA	cellular organisms::Eukaryota
NBSEQ	33
KEYWORDS:
domain	128
polymerase	64
integrase	61
gag	58
rna	33
dependent	33
dna	33
reverse	33
transcriptase	33
like	31
beta	31
core	31
retroviral	31
sh3	31
polyprotein	30
pre	30
barrel	30
pol	30
type	28
polypeptide	28
copia	28
ltr	28
zinc	13
knuckle	13
terminal	3
tnsb	3
unknown	2
function	2
associated	1
box	1
propeller	1
duf4219	1
duf6598	1
KEYWORDS FROM SEQUENCES:
polyprotein	22
pol	15
gag	13
putative	7
protein	6
glycine	5
max	5
retrotransposon	5
zea	4
mays	4
oryza	3
phyllostachys	3
edulis	3
arabidopsis	3
thaliana	3
copia	3
like	2
sativa	2
integrase	2
vulgaris	2
dioica	2
phanerochaete	2
chrysosporium	2
japonicus	1
protease	1
type	1
japonica	1
beta	1
solanum	1
australiensis	1
and	1
group	1
brassica	1
botrytis	1
ipomoea	1
batatas	1
gossypium	1
helianthus	1
annuus	1
fragaria	1
prunus	1
ty1	1
ananassa	1
var	1
chilense	1
oleracea	1
bryonia	1
barbadense	1
rnaseh	1
phaseolus	1
momordica	1
persica	1
lotus	1
medicago	1
truncatula	1
SEQUENCES:
acc|GENBANK|AMY96445.1|GENBANK|KU052576|gag/pol protein [Momordica dioica]
acc|GENBANK|AAG52949.1|GENBANK|AY016208|gag/pol polyprotein [Arabidopsis thaliana]
acc|GENBANK|AAO73521.1|GENBANK|AY205608|gag-pol polyprotein [Glycine max]
acc|GENBANK|AAO73523.1|GENBANK|AY205609|gag-pol polyprotein [Glycine max]
acc|GENBANK|AAO73529.1|GENBANK|AY205612|gag-pol polyprotein [Glycine max]
acc|GENBANK|ADJ18449.1|GENBANK|HM365926|gag/pol protein [Bryonia dioica]
acc|GENBANK|AGW47867.1|GENBANK|KF303287|polyprotein [Phaseolus vulgaris]
acc|GENBANK|AIC77183.1|GENBANK|KF740825|polyprotein [Gossypium barbadense]
acc|GENBANK|AHL77759.1|GENBANK|KJ150676|polyprotein [Prunus persica]
acc|GENBANK|USI00829.1|GENBANK|ON753198|retrotransposon protein, putative Ty1-copia [Oryza sativa Japonica Group]
acc|GENBANK|ACN78973.1|GENBANK|FJ225394|copia-type polyprotein [Glycine max]
acc|GENBANK|ACL97383.1|GENBANK|FJ544851|Gag-Pol polyprotein [Medicago truncatula]
acc|GENBANK|ACL97387.1|GENBANK|FJ544857|Gag-Pol polyprotein [Lotus japonicus]
acc|GENBANK|ACS74199.1|GENBANK|FJ871121|putative gag-pol polyprotein [Fragaria x ananassa]
acc|GENBANK|CAX68207.1|GENBANK|FN298618|Copia-like retrotransposon [Helianthus annuus]
acc|GENBANK|ADB85411.1|GENBANK|GQ252886|putative retrotransposon protein [Phyllostachys edulis]
acc|GENBANK|ADB85429.1|GENBANK|GQ252887|putative retrotransposon protein [Phyllostachys edulis]
acc|GENBANK|ADB85430.1|GENBANK|GQ252887|putative retrotransposon protein [Phyllostachys edulis]
acc|GENBANK|AAD12997.1|GENBANK|AF082133|gag-pol polyprotein [Zea mays]
acc|GENBANK|AAD12998.1|GENBANK|AF082134|pol polyprotein [Zea mays]
acc|GENBANK|AAK29467.1|GENBANK|AF279585|polyprotein-like [Solanum chilense]
acc|GENBANK|AAM22635.1|GENBANK|AF434192|Gag and Pol [Zea mays]
acc|GENBANK|CAC37622.1|GENBANK|AJ292423|polyprotein [Arabidopsis thaliana]
acc|GENBANK|AAC49502.1|GENBANK|U68408|Pol [Zea mays]
acc|GENBANK|CAA31653.1|GENBANK|X13291|polyprotein [Arabidopsis thaliana]
acc|GENBANK|BAA22288.1|GENBANK|D85597|polyprotein [Oryza australiensis]
acc|GENBANK|AAZ28935.1|GENBANK|DQ097838|polyprotein [Phanerochaete chrysosporium RP-78]
acc|GENBANK|AAZ28937.1|GENBANK|DQ097840|polyprotein [Phanerochaete chrysosporium RP-78]
acc|GENBANK|ABH07409.1|GENBANK|DQ482460|putative pol polyprotein [Brassica oleracea var. botrytis]
acc|GENBANK|ABH08430.1|GENBANK|DQ851167|putative integrase [Beta vulgaris]
acc|GENBANK|BAB03249.1|GENBANK|AB046118|polyprotein [Oryza sativa]
acc|GENBANK|BAD34493.1|GENBANK|AB162659|Gag-Pol [Ipomoea batatas]
acc|GENBANK|BAG72096.1|GENBANK|AB370254|Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
