LENGTH	1296
LCA	Viruses::Riboviria::Pararnavirae::Artverviricota::Revtraviricetes::Ortervirales::Retroviridae::Orthoretrovirinae
NBSEQ	82
KEYWORDS:
domain	366
integrase	195
reverse	159
transcriptase	159
dna	138
like	129
binding	126
zinc	86
rna	81
dependent	81
polymerase	81
thumb	78
rnase	77
core	69
rnaseh	63
ervk	63
gag	37
protein	29
retroviral	22
terminal	21
p24	19
protease	12
dutpase	12
aspartyl	12
polyprotein	9
viral	9
finger	9
p10	9
patch	9
knuckle	8
deaminase	3
dctp	3
envelope	2
tnsb	2
glycoprotein	1
viruses	1
retro	1
transcribing	1
KEYWORDS FROM SEQUENCES:
pol	60
protein	38
retrovirus	29
virus	28
polymerase	15
avian	15
pro	14
gag	13
homo	12
sapiens	12
endogenous	11
leukosis	10
polyprotein	9
simian	9
tumor	7
precursor	5
human	5
sheep	5
musculus	5
enzootic	5
nasal	5
jaagsiekte	5
reverse	4
transcriptase	4
mammary	4
mus	4
associated	3
disease	3
dna	3
mouse	3
desmodus	3
rotundus	3
ovis	3
aries	3
myeloblastosis	3
lymphoproliferative	3
putative	2
type	2
monkey	2
truncated	2
integrase	2
fusion	2
dog	2
tumour	2
notamacropus	2
prairie	2
retroviridae	2
rufogriseus	2
pr160	2
viral	1
protease	1
bat	1
bovine	1
squirrel	1
and	1
black	1
env	1
faecal	1
leukemia	1
eugenii	1
hamster	1
rsa	1
mason	1
sarcoma	1
oryctolagus	1
cuniculus	1
trichosurus	1
vulpecula	1
pfizer	1
castaneus	1
gunnison	1
ch15	1
prosimian	1
syrian	1
rous	1
gansuensis	1
eav	1
SEQUENCES:
acc|REFSEQ|YP_009243641.1|REFSEQ|NC_029852|putative viral DNA polymerase [Bovine retrovirus CH15]
acc|REFSEQ|YP_009305201.1|REFSEQ|NC_031326|pol protein [Simian retrovirus 8]
acc|REFSEQ|NP_040550.1|REFSEQ|NC_001408|polymerase [Avian leukosis virus - RSA]
acc|REFSEQ|YP_003864102.1|REFSEQ|NC_014474|pol protein [Simian retrovirus 4]
acc|REFSEQ|NP_862833.2|REFSEQ|NC_004994|gag-pro-pol fusion [Enzootic nasal tumor virus 2]
acc|REFSEQ|NP_056880.1|REFSEQ|NC_001503|Pr160 [Mouse mammary tumor virus]
acc|REFSEQ|NP_056891.1|REFSEQ|NC_001550|RT-IN [Mason-Pfizer monkey virus]
acc|REFSEQ|NP_041186.1|REFSEQ|NC_001494|pol protein [Jaagsiekte sheep retrovirus]
acc|REFSEQ|YP_004222728.1|REFSEQ|NC_015116|pol polyprotein [Avian leukemia virus]
acc|REFSEQ|NP_041261.1|REFSEQ|NC_001514|pol protein [Squirrel monkey retrovirus]
acc|GENBANK|ANC55859.1|NEIGHBOR|KU179192|gag-pro-pol protein [Enzootic nasal tumor virus 2]
acc|GENBANK|ANG58659.1|NEIGHBOR|KU258870|pol protein [Enzootic nasal tumor virus 2]
acc|GENBANK|AMP18914.1|NEIGHBOR|KU375453|pol protein [Avian leukosis virus]
acc|GENBANK|AAA46304.1|GENBANK|L10922|pol [Avian myeloblastosis-associated virus type 1]
acc|GENBANK|AAA46307.1|GENBANK|L10924|pol [Avian myeloblastosis-associated virus type 2]
acc|GENBANK|BBG56792.1|GENBANK|LC426347|pol protein [Simian retrovirus 5]
acc|GENBANK|ABV71109.1|GENBANK|EF680308|Pol protein [Ovis aries]
acc|GENBANK|ABV71118.1|GENBANK|EF680312|Pro-Pol [Ovis aries]
acc|GENBANK|QCY65254.1|GENBANK|MK164396|pol protein [Enzootic nasal tumour virus 2]
acc|GENBANK|BCW03412.1|GENBANK|LC631488|DNA polymerase [Notamacropus rufogriseus rufogriseus]
acc|GENBANK|BDB04027.1|GENBANK|LC647196|protease/DNA polymerase [Notamacropus eugenii]
acc|GENBANK|BAA03767.1|NEIGHBOR|D16249|gag pro pol polyprotein [Mouse mammary tumor virus]
acc|GENBANK|ABO60875.1|NEIGHBOR|EF467236|pol polyprotein [Avian leukosis virus]
acc|GENBANK|QDK64674.1|GENBANK|MK304634|pro-pol [Black Syrian hamster retrovirus]
acc|GENBANK|QIB89443.1|NEIGHBOR|MN161849|gag-pro-pol polyprotein [Jaagsiekte sheep retrovirus]
acc|GENBANK|ABG91576.1|GENBANK|DQ821442|reverse transcriptase [Homo sapiens]
acc|GENBANK|AAA47732.1|NEIGHBOR|M11841|pol protein [Simian retrovirus 1]
acc|GENBANK|AAA46542.1|NEIGHBOR|M15122|Pr160 gag pro pol precursor [Mouse mammary tumor virus]
acc|GENBANK|AAA47562.1|NEIGHBOR|M16605|pol protein [Simian retrovirus 2]
acc|GENBANK|AAA46253.1|GENBANK|M65014|pol protein [Jaagsiekte sheep retrovirus]
acc|GENBANK|XKQ45524.1|NEIGHBOR|PQ476241|pol protein [Avian leukosis virus]
acc|GENBANK|ABD97982.1|GENBANK|DQ436346|putative gag-pol protein [Mus musculus]
acc|GENBANK|WDE30417.1|NEIGHBOR|OP856678|pol protein [Avian leukosis virus]
acc|GENBANK|QLI47668.1|GENBANK|MT138119|pol polyprotein [Retroviridae sp.]
acc|GENBANK|WOC29326.1|NEIGHBOR|OR344913|pol protein [Desmodus rotundus endogenous retrovirus]
acc|GENBANK|WOC29390.1|NEIGHBOR|OR344929|truncated pol protein [Desmodus rotundus endogenous retrovirus]
acc|GENBANK|ADI76909.1|GENBANK|HM143845|pol protein [Simian retrovirus 1]
acc|GENBANK|ADO34852.1|NEIGHBOR|HM452342|polymerase polyprotein [Avian leukosis virus]
acc|GENBANK|AAF29458.1|GENBANK|AF153615|Pol [Ovis aries]
acc|GENBANK|AAF36395.1|GENBANK|AF224725|pol polyprotein [Trichosurus vulpecula]
acc|GENBANK|AAM81191.1|GENBANK|AF480925|pol protein [Oryctolagus cuniculus]
acc|GENBANK|UGO47157.1|GENBANK|OL519619|pol protein [Retroviridae sp.]
acc|GENBANK|UVF62130.1|GENBANK|ON872531|pol protein [Bat faecal associated retrovirus 1]
acc|GENBANK|XFA11825.1|GENBANK|PQ178888|gag-pro-pol fusion [Enzootic nasal tumour virus 2]
acc|GENBANK|AAF88167.1|GENBANK|AF074086|polymerase [Homo sapiens]
acc|GENBANK|AAC63290.1|GENBANK|AF080229|polymerase [Homo sapiens]
acc|GENBANK|AAC63291.1|GENBANK|AF080231|polymerase [Homo sapiens]
acc|GENBANK|AAC63292.1|GENBANK|AF080232|polymerase [Homo sapiens]
acc|GENBANK|AAD51791.1|GENBANK|AF164609|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAD51793.1|GENBANK|AF164611|Gag-Pro-Pol-Env protein [Homo sapiens]
acc|GENBANK|AAD51796.1|GENBANK|AF164613|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAD51797.1|GENBANK|AF164614|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAD51799.1|GENBANK|AF164615|Gag-Pro-Pol protein [Homo sapiens]
acc|GENBANK|AAL60056.1|GENBANK|AF333072|pol protein [Homo sapiens]
acc|GENBANK|CAA76879.1|NEIGHBOR|Y17832|pol protein [Human endogenous retrovirus K]
acc|GENBANK|CAA76882.1|NEIGHBOR|Y17833|pol protein [Human endogenous retrovirus K]
acc|GENBANK|QTI96652.1|GENBANK|MT787217|pol [Prosimian retrovirus 1]
acc|GENBANK|ACL14945.1|GENBANK|FJ041197|reverse transcriptase [Rous sarcoma virus]
acc|GENBANK|XLL18927.1|GENBANK|PQ434821|pol protein [Mus musculus castaneus]
acc|GENBANK|XLL18931.1|GENBANK|PQ434825|pol protein [Mus musculus gansuensis]
acc|GENBANK|AFV99544.1|NEIGHBOR|JX848322|pol protein [Avian leukosis virus]
acc|GENBANK|AGV75852.1|GENBANK|KC802224|pol precursor polyprotein [Lymphoproliferative disease virus]
acc|GENBANK|QNN81291.1|GENBANK|MT559331|pol [Mus musculus musculus]
acc|GENBANK|AAB31929.1|GENBANK|S74099|polyprotein II [Avian myeloblastosis virus]
acc|GENBANK|AAA62195.1|GENBANK|U09568|Pol precursor [Lymphoproliferative disease virus]
acc|GENBANK|AAB07711.1|GENBANK|U47118|polymerase [Human endogenous retrovirus]
acc|GENBANK|AAC97565.1|NEIGHBOR|U85505|polymerase [Simian endogenous retrovirus]
acc|GENBANK|AAC97567.1|GENBANK|U85506|polymerase [Simian endogenous retrovirus]
acc|GENBANK|CAA45618.1|GENBANK|X64337|Reverse Transcriptase-and Integrase precursor [Lymphoproliferative disease virus]
acc|GENBANK|CAA71417.1|GENBANK|Y10391|pol protein [Human endogenous retrovirus K]
acc|GENBANK|BAG16457.1|NEIGHBOR|AB303223|polymerase [Avian leukosis virus]
acc|GENBANK|BAM71050.1|GENBANK|AB611707|pol protein [Simian retrovirus Y]
acc|GENBANK|AAG18012.1|GENBANK|AF248269|gag-pro-pol precursor protein [Human mammary tumor virus]
acc|GENBANK|AAK38686.1|NEIGHBOR|AF357971|polymerase [Jaagsiekte sheep retrovirus]
acc|GENBANK|CAC28509.2|GENBANK|AJ292966|reverse transcriptase/integrase [Avian endogenous retrovirus EAV-HP]
acc|GENBANK|AAO27434.1|GENBANK|AY186778|polymerase [Homo sapiens]
acc|GENBANK|XDD41194.1|NEIGHBOR|PQ063994|pol protein [Avian leukosis virus]
acc|GENBANK|AJR27940.1|GENBANK|KP175583|truncated pol [Desmodus rotundus endogenous retrovirus]
acc|GENBANK|AJG42161.1|NEIGHBOR|KP284572|Pol [Avian leukosis virus ev/J]
acc|GENBANK|AKE78833.1|NEIGHBOR|KP691837|pol protein [Jaagsiekte sheep retrovirus]
acc|GENBANK|QKU38051.1|GENBANK|MT361316|Pol [Gunnison's prairie dog retrovirus]
acc|GENBANK|QKU38055.1|GENBANK|MT361317|Pol [Endogenous prairie dog retrovirus]
