LENGTH	1197
LCA	Viruses::Riboviria::Pararnavirae::Artverviricota::Revtraviricetes::Ortervirales::Retroviridae::Orthoretrovirinae
NBSEQ	132
KEYWORDS:
domain	435
reverse	304
transcriptase	304
rnase	303
like	255
integrase	229
found	202
zinc	198
finger	146
dna	145
core	136
protease	115
aspartyl	115
terminal	105
virus	101
murine	101
leukemia	101
mlv	101
h2c2	98
rna	97
dependent	97
polymerase	97
protein	85
retroviral	77
binding	74
gag	74
probable	48
polyprotein	42
shell	34
p30	34
p15	31
matrix	31
knuckle	26
coat	21
putative	20
p12	20
inner	20
tnsb	4
env	1
KEYWORDS FROM SEQUENCES:
pol	96
virus	64
protein	50
polyprotein	49
leukemia	39
gag	33
murine	25
retrovirus	24
endogenous	16
pro	15
precursor	14
polymerase	13
porcine	12
mus	12
putative	10
musculus	10
feline	9
sus	9
scrofa	9
reticuloendotheliosis	9
mulv	9
reverse	8
transcriptase	8
xenotropic	8
gammaretrovirus	8
truncated	7
bat	6
related	6
integrase	6
felis	6
odocoileus	5
catus	5
hemionus	5
recombinant	4
gibbon	4
ape	4
koala	3
friend	3
ralv	3
monkey	2
endonuclease	2
erv	2
fusion	2
epidermal	2
homo	2
sapiens	2
woolly	2
sarcoma	2
prexmrv	2
castaneus	2
walleye	2
hyperplasia	2
rna	1
hypothetical	1
dependent	1
associated	1
protease	1
dna	1
rhinolophus	1
ferrumequinum	1
necrosis	1
forming	1
spleen	1
rhinella	1
marina	1
cell	1
strain	1
multiple	1
baboon	1
end	1
rat	1
mink	1
envelope	1
391	1
409	1
cervicolor	1
flying	1
fox	1
syncytial	1
megaderma	1
enhydra	1
lutris	1
focus	1
moloney	1
silvestris	1
vp35	1
rd114	1
caroli	1
galidia	1
echidna	1
gpr80	1
dunni	1
popaeus	1
pr180	1
chick	1
nereis	1
herv	1
lyra	1
476	1
sclerosis	1
SEQUENCES:
acc|REFSEQ|YP_009109689.1|REFSEQ|NC_022517|gag-pol precursor polyprotein [Baboon endogenous virus strain M7]
acc|REFSEQ|NP_056790.1|REFSEQ|NC_001885|pol polyprotein [Gibbon ape leukemia virus]
acc|REFSEQ|YP_001497148.1|REFSEQ|NC_009889|gag-pol precursor polyprotein [RD114 retrovirus]
acc|REFSEQ|YP_001165470.1|REFSEQ|NC_009424|hypothetical protein [Woolly monkey sarcoma virus]
acc|REFSEQ|YP_223871.1|REFSEQ|NC_006934|protease/polymerase [Reticuloendotheliosis virus]
acc|REFSEQ|NP_057933.2|REFSEQ|NC_001501|Pr180 [Moloney murine leukemia virus]
acc|REFSEQ|NP_047255.1|REFSEQ|NC_001940|Gag-Pro-Pol precursor polyprotein gPr80 [Feline leukemia virus]
acc|REFSEQ|NP_040333.1|REFSEQ|NC_001362|RNA-dependent DNA polymerase [Friend murine leukemia virus]
acc|REFSEQ|YP_009513211.1|REFSEQ|NC_039228|pol protein [Koala retrovirus]
acc|REFSEQ|YP_009665179.1|REFSEQ|NC_043194|pol polyprotein [Walleye epidermal hyperplasia virus 1]
acc|REFSEQ|YP_009665180.1|REFSEQ|NC_043195|pol polyprotein [Walleye epidermal hyperplasia virus 2]
acc|REFSEQ|YP_009665181.1|REFSEQ|NC_043196|polymerase [Chick syncytial virus]
acc|GENBANK|ASU50141.1|GENBANK|KY484771|gag-pol polyprotein [Porcine endogenous retrovirus A]
acc|GENBANK|ARB03462.1|NEIGHBOR|KY574504|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|ARB03474.1|NEIGHBOR|KY574508|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|ARB03480.1|NEIGHBOR|KY574510|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AND74259.1|NEIGHBOR|KU204702|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|AMK06426.1|NEIGHBOR|KU324805|putative gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AMZ03629.1|GENBANK|KU981174|pol [Reticuloendotheliosis virus]
acc|GENBANK|BBI55082.1|NEIGHBOR|LC462187|gag-pol precursor polyprotein [Feline leukemia virus]
acc|GENBANK|ABM65596.1|GENBANK|DQ996273|pol protein [Sus scrofa]
acc|GENBANK|ACF20333.1|GENBANK|EU789636|putative gag-pol polyprotein [Sus scrofa]
acc|GENBANK|AWS20967.1|GENBANK|MG981046|pol protein [Rhinella marina endogenous retrovirus]
acc|GENBANK|QDA02050.1|GENBANK|MK040728|pol protein [Flying-fox retrovirus]
acc|GENBANK|AEI83431.1|GENBANK|HQ536005|pol protein [Sus scrofa]
acc|GENBANK|AEI83435.1|GENBANK|HQ536008|pol protein [Sus scrofa]
acc|GENBANK|AEW89632.1|GENBANK|JN592050|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AGK89504.1|GENBANK|KC116218|pol protein [Sus scrofa]
acc|GENBANK|AHI49861.1|GENBANK|KC934943|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49862.1|GENBANK|KC934944|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AHI49864.1|GENBANK|KC934946|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AKA58521.1|GENBANK|KP261824|pol polyprotein [Odocoileus hemionus]
acc|GENBANK|AOT85955.1|GENBANK|KX018258|gag-pol precursor polyprotein [Enhydra lutris nereis]
acc|GENBANK|BAQ55417.1|GENBANK|LC005746|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BAQ55420.1|GENBANK|LC005749|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BCO16366.1|GENBANK|LC597234|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|WPA94626.1|GENBANK|OR761825|pol protein [Rhinolophus ferrumequinum retrovirus]
acc|GENBANK|BAA22064.1|NEIGHBOR|D88386|gag-pol polyprotein (precursor protein) [Friend murine leukemia virus]
acc|GENBANK|ABC26827.1|GENBANK|DQ237902|polymerase [Spleen necrosis virus]
acc|GENBANK|ABC26829.1|GENBANK|DQ237906|polymerase [Reticuloendotheliosis virus]
acc|GENBANK|ABC26830.1|GENBANK|DQ237908|polymerase [Reticuloendotheliosis virus]
acc|GENBANK|ABB83225.1|NEIGHBOR|DQ241301|putative gag-pro-pol polyprotein [Xenotropic MuLV-related virus VP35]
acc|GENBANK|ABS85542.1|NEIGHBOR|EU035300|putative gag-pro-pol polyprotein [Xenotropic murine leukemia virus]
acc|GENBANK|ABU54793.1|NEIGHBOR|EU075329|gag-pro-pol polyprotein [Murine leukemia virus]
acc|GENBANK|QDH76136.1|GENBANK|MK948412|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|BAB47169.1|GENBANK|AB050721|polymerase [Mus musculus castaneus]
acc|GENBANK|QAS62334.1|GENBANK|MH198419|truncated pol protein [Sus scrofa]
acc|GENBANK|WHP37833.1|GENBANK|OP921768|pol protein [Gammaretrovirus sp.]
acc|GENBANK|WOZ03493.1|NEIGHBOR|OR682571|gag pol pro [Feline leukemia virus]
acc|GENBANK|CAB38566.1|GENBANK|X51929|polyprotein [Felis silvestris]
acc|GENBANK|AAA46527.1|GENBANK|M10100|pol protein [Murine leukemia virus]
acc|GENBANK|AAC78249.1|GENBANK|M77194|polymerase [Rat leukemia virus]
acc|GENBANK|AAA79247.1|NEIGHBOR|M87550|putative reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AYG96594.1|NEIGHBOR|MF681672|gag-pro-pol polyprotein [Feline leukemia virus]
acc|GENBANK|AYG96643.1|GENBANK|MG020273|gag-pro-pol protein [Feline leukemia virus]
acc|GENBANK|UWV21323.1|NEIGHBOR|MW839565|pol protein [Feline leukemia virus]
acc|GENBANK|AGP25480.1|GENBANK|KC460271|pol protein [Mus caroli]
acc|GENBANK|AMK06435.1|GENBANK|KU324808|pol [Mus musculus musculus]
acc|GENBANK|WXX18640.1|NEIGHBOR|PP526163|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|WXX18643.1|NEIGHBOR|PP526164|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|WXX18646.1|NEIGHBOR|PP526165|pol protein [Reticuloendotheliosis virus]
acc|GENBANK|ADG27337.1|GENBANK|GU980187|truncated pol protein [Porcine endogenous retrovirus]
acc|GENBANK|ADU55769.1|GENBANK|HQ385294|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|ADU55770.1|GENBANK|HQ385295|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|ADU55772.1|GENBANK|HQ385300|pol protein [Xenotropic MuLV-related virus]
acc|GENBANK|AEF12610.1|GENBANK|HQ540593|pol protein [Porcine endogenous retrovirus B]
acc|GENBANK|AEF12615.1|GENBANK|HQ540595|pol protein [Porcine endogenous retrovirus B]
acc|GENBANK|WRK24264.1|GENBANK|PP028550|putative gag-pro-pol polyprotein [Xenotropic murine leukemia virus]
acc|GENBANK|BAM33593.1|GENBANK|AB674441|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|BAM33596.1|GENBANK|AB674444|Gag-Pol precursor polyprotein [Felis catus]
acc|GENBANK|CAJ76246.1|GENBANK|AM229311|polyprotein [Sus scrofa]
acc|GENBANK|CAJ76250.1|GENBANK|AM229313|polyprotein [Sus scrofa]
acc|GENBANK|CAJ76251.1|GENBANK|AM229313|truncated POL protein [Sus scrofa]
acc|GENBANK|UUG66872.1|GENBANK|OP081083|pol protein [Gammaretrovirus sp.]
acc|GENBANK|AAC52075.1|GENBANK|AF026246|HERV-E integrase [Homo sapiens]
acc|GENBANK|AAP29639.1|GENBANK|AF499232|pol protein [Homo sapiens]
acc|GENBANK|QQH14880.1|GENBANK|MT648453|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14882.1|GENBANK|MT648455|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14884.1|GENBANK|MT648457|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14885.1|GENBANK|MT648458|pol protein [Bat gammaretrovirus]
acc|GENBANK|QQH14887.1|GENBANK|MT648460|pol protein [Bat gammaretrovirus]
acc|GENBANK|CCA30551.1|NEIGHBOR|FR837946|gag-pro-pol polyprotein [Xenotropic MuLV-related virus]
acc|GENBANK|ACY30461.1|GENBANK|GQ497345|putative gag polyprotein [Xenotropic MuLV-related virus]
acc|GENBANK|CAA36849.1|GENBANK|X52622|integrase (409 AA) [Mus musculus]
acc|GENBANK|AFM52260.1|GENBANK|JQ951956|Pol [Megaderma lyra retrovirus]
acc|GENBANK|AGO86849.1|NEIGHBOR|KC779547|gag-pol polyprotein [Koala retrovirus]
acc|GENBANK|AGN73375.1|GENBANK|KF170221|pol protein [Bat gammaretrovirus]
acc|GENBANK|AGV92853.1|GENBANK|KF313135|polymerase [Galidia ERV]
acc|GENBANK|AGV92856.1|GENBANK|KF313136|polymerase [Echidna ERV]
acc|GENBANK|AGU99874.1|GENBANK|KF584029|gag-pro-pol polyprotein [PreXMRV-1/PreXMRV-2 recombinant]
acc|GENBANK|AHY24815.1|NEIGHBOR|KF786285|pol protein [Koala retrovirus]
acc|GENBANK|AAA39757.1|GENBANK|M19005|pol protein [Mus musculus]
acc|GENBANK|WOL52681.1|GENBANK|OR574834|pol protein [Porcine endogenous retrovirus C]
acc|GENBANK|AAA18407.1|GENBANK|AH000833|pol protein [Mus musculus]
acc|GENBANK|AAN46639.1|GENBANK|AY140896|truncated pol/envelope fusion protein [Mus musculus]
acc|GENBANK|AAO37227.1|GENBANK|AY219536|integrase [Mus musculus]
acc|GENBANK|AAO37253.1|GENBANK|AY219549|truncated integrase [Mus musculus]
acc|GENBANK|AAY27069.1|GENBANK|AY999005|truncated polyprotein [Mus musculus castaneus]
acc|GENBANK|AAA92679.1|NEIGHBOR|U13766|gag-pol polyprotein [Murine leukemia virus]
acc|GENBANK|AAK50381.1|NEIGHBOR|U43202|pol precursor protein [Murine leukemia virus]
acc|GENBANK|AAC55819.1|GENBANK|U51729|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAC55820.1|GENBANK|U51730|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAC80264.1|NEIGHBOR|U60065|pol polyprotein [Gibbon ape leukemia virus]
acc|GENBANK|AAC58562.1|GENBANK|U87552|integrase [Murine leukemia virus]
acc|GENBANK|CAA25685.1|GENBANK|X01455|C end of pol protein (reverse transcriptase) [Reticuloendotheliosis virus]
acc|GENBANK|CAA28802.1|GENBANK|X05165|endonuclease (391 AA) [Murine leukemia virus]
acc|GENBANK|CAA31582.1|GENBANK|X13194|pol endonuclease [Gibbon ape leukemia virus]
acc|GENBANK|CAA33367.1|GENBANK|X15311|reverse transcriptase (476 AA) [Woolly monkey sarcoma virus]
acc|GENBANK|CAA55543.1|GENBANK|X78945|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|BAD52413.1|NEIGHBOR|AB187565|POL polyprotein precursor [Murine leukemia virus]
acc|GENBANK|BAK41647.1|GENBANK|AB635620|integrase [Feline leukemia virus]
acc|GENBANK|BAM45657.1|NEIGHBOR|AB672612|pol polyprotein [Feline leukemia virus]
acc|GENBANK|AAB58752.1|GENBANK|AF003736|reverse transcriptase [Murine leukemia virus]
acc|GENBANK|AAB66528.1|GENBANK|AF009668|polyprotein [Multiple sclerosis associated retrovirus]
acc|GENBANK|AAC31805.1|GENBANK|AF053745|pol polyprotein [Mus dunni endogenous virus]
acc|GENBANK|AAD30536.1|GENBANK|AF133256|reverse transcriptase [Friend mink cell focus-forming virus]
acc|GENBANK|AAD34536.1|GENBANK|AF136491|polymerase [Murine leukemia virus]
acc|GENBANK|AAG10201.1|GENBANK|AF290913|polyprotein [Murine leukemia virus]
acc|GENBANK|AAK16155.1|GENBANK|AF327437|pol polyprotein [Mus cervicolor popaeus endogenous virus]
acc|GENBANK|AAL87853.1|GENBANK|AF435966|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|AAL87856.1|GENBANK|AF435967|pol protein [Porcine endogenous retrovirus]
acc|GENBANK|CAC82505.2|GENBANK|AJ279057|Pol protein [Porcine endogenous retrovirus]
acc|GENBANK|CAC39617.1|GENBANK|AJ293656|polymerase [Porcine endogenous retrovirus C]
acc|GENBANK|CAC39626.1|GENBANK|AJ293657|polymerase [Porcine endogenous retrovirus C]
acc|GENBANK|AAM29194.1|GENBANK|AY099324|gag-pol polyprotein [Porcine endogenous retrovirus B]
acc|GENBANK|AAO46143.1|GENBANK|AY236757|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|AAO46146.1|GENBANK|AY236759|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|AAO46150.1|GENBANK|AY236761|pol protein [Recombinant M-MuLV/RaLV retrovirus]
acc|GENBANK|AAR12481.1|GENBANK|AY349136|truncated gag-pol fusion protein [Murine leukemia virus]
acc|GENBANK|AAV68488.2|NEIGHBOR|AY818896|gag-pol polyprotein [Murine leukemia virus]
acc|GENBANK|WCB86803.1|NEIGHBOR|MZ964580|gag-pro-pol precursor [Feline leukemia virus]
acc|GENBANK|ALV83306.1|NEIGHBOR|KT724049|pol polyprotein [Gibbon ape leukemia virus]
